GE19402 (Drosophila yakuba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0236745 T117022_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.827 1.000
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.827 1.000
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.827 1.000
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.827 1.000
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.769 0.842
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0264412 C2H2 ZF 348 370
FBpp0264412 C2H2 ZF 383 405
FBpp0264412 C2H2 ZF 409 431
FBpp0264412 C2H2 ZF 437 459
FBpp0264412 C2H2 ZF 465 486

Links

Other C2H2 ZF family TFs
Other Drosophila yakuba TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL15 Vitis vinifera VIT_13s0158g00100 I 0.000
AGL15 Populus trichocarpa POPTR_0009s06060 I 0.000
AGL18 Arabidopsis thaliana AT3G57390 I 0.000
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.000
AGL71 Arabidopsis thaliana AT5G51870 I 0.000
AGL72 Arabidopsis thaliana AT5G51860 I 0.000
Bo1g040180 Brassica oleracea Bo1g040180 I 0.000
Bo4g111230 Brassica oleracea Bo4g111230 I 0.000
Bo6g072840 Brassica oleracea Bo6g072840 I 0.000
Bo8g091790 Brassica oleracea Bo8g091790 I 0.000
Bo9g103660 Brassica oleracea Bo9g103660 I 0.000
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.000
Bra003278 Brassica rapa Bra003278 I 0.000
Bra007324 Brassica rapa Bra007324 I 0.000
Bra013891 Brassica rapa Bra013891 I 0.000
Bra014628 Brassica rapa Bra014628 I 0.000
Bra028282 Brassica rapa Bra028282 I 0.000
Bra029155 Brassica rapa Bra029155 I 0.000
Cagra.0578s0070 Capsella grandiflora Cagra.0578s0070 I 0.000
Carubv10017886m.g Capsella rubella Carubv10017886m.g I 0.000
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.000
cassava3099.m1 Manihot esculenta cassava3099.m1 I 0.000
Ca_19854 Cicer arietinum Ca_19854 I 0.000
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.000
Cla006973 Citrullus lanatus Cla006973 I 0.000
Cucsa.194800 Cucumis sativus Cucsa.194800 I 0.000
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I 0.000
F775_18161 Aegilops tauschii F775_18161 I 0.000
gene05027-v1.0-hybrid Fragaria vesca gene05027-v1.0-hybrid I 0.000
gene12119-v1.0-hybrid Fragaria vesca gene12119-v1.0-hybrid I 0.000
gene29503-v1.0-hybrid Fragaria vesca gene29503-v1.0-hybrid I 0.000
GLYMA02G33040 Glycine max GLYMA02G33040 I 0.000
Gorai.003G090800 Gossypium raimondii Gorai.003G090800 I 0.000
LjSGA_019451.1 Lotus japonicus LjSGA_019451.1 I 0.000
MDP0000135652 Malus domestica MDP0000135652 I 0.000
MDP0000144516 Malus domestica MDP0000144516 I 0.000
mgf022625m Mimulus guttatus mgf022625m N 0.000
mgf024454m Mimulus guttatus mgf024454m N 0.000
MTR_1g041615 Medicago truncatula MTR_1g041615 I 0.000
MTR_1g053070 Medicago truncatula MTR_1g053070 I 0.000
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.000
PGSC0003DMG400023729 Solanum tuberosum PGSC0003DMG400023729 I 0.000
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I 0.000
SapurV1A.0027s0860 Salix purpurea SapurV1A.0027s0860 I 0.000
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.000
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.000
Solyc10g080030.1 Solanum lycopersicum Solyc10g080030.1 I 0.000
TCM_024579 Theobroma cacao TCM_024579 I 0.000
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.000
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.000
Traes_1AS_24511D656 Triticum aestivum Traes_1AS_24511D656 I 0.000
Traes_1DS_A0312C264 Triticum aestivum Traes_1DS_A0312C264 I 0.000