GSMUA_Achr5G28550_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr5G28550_001 T118713_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.794 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.789 0.804
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.789 0.804
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.765 0.739
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.757 0.783
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.756 0.739
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.756 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P28550_001 C2H2 ZF 48 70
GSMUA_Achr5P28550_001 C2H2 ZF 93 115

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

359 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003923 Calypte anna Aan_R003923 I
Aan_R015393 Calypte anna Aan_R015393 I
Afo_R002230 Aptenodytes forsteri Afo_R002230 I
Afo_R008962 Aptenodytes forsteri Afo_R008962 N
Afo_R015753 Aptenodytes forsteri Afo_R015753 I
Alligator_sinensis_CCG010998.1 Alligator sinensis Alligator_sinensis_CCG010998.1 N
Alligator_sinensis_CCG017490.1 Alligator sinensis Alligator_sinensis_CCG017490.1 I
Brh_R003016 Buceros rhinoceros Brh_R003016 I
Brh_R012570 Buceros rhinoceros Brh_R012570 N
Brh_R013325 Buceros rhinoceros Brh_R013325 I
Cmyd_10003336 Chelonia mydas Cmyd_10003336 I
ENSAMEG00000000278 Ailuropoda melanoleuca ENSAMEG00000000278 I
ENSAMEG00000009982 Ailuropoda melanoleuca ENSAMEG00000009982 N
ENSAMEG00000011320 Ailuropoda melanoleuca ENSAMEG00000011320 I
ENSAMXG00000000221 Astyanax mexicanus ENSAMXG00000000221 I
ENSAMXG00000017898 Astyanax mexicanus ENSAMXG00000017898 N
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I
ENSAPLG00000008667 Anas platyrhynchos ENSAPLG00000008667 I
ENSBTAP00000026370-D1 Bos grunniens ENSBTAP00000026370-D1 N
ENSCSAG00000000939 Chlorocebus sabaeus ENSCSAG00000000939 N
ENSCSAG00000007158 Chlorocebus sabaeus ENSCSAG00000007158 I
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I
ENSFALG00000000490 Ficedula albicollis ENSFALG00000000490 N
ENSFALG00000005879 Ficedula albicollis ENSFALG00000005879 I
ENSFALG00000006639 Ficedula albicollis ENSFALG00000006639 I
ENSGALG00000014208 Gallus gallus ENSGALG00000014208 I
ENSGALG00000016439 Gallus gallus ENSGALG00000016439 I
ENSGMOG00000003256 Gadus morhua ENSGMOG00000003256 I
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I
ENSLACG00000015480 Latimeria chalumnae ENSLACG00000015480 N
ENSLOCG00000016835 Lepisosteus oculatus ENSLOCG00000016835 I
ENSMMUP00000002046 Macaca fascicularis ENSMMUP00000002046 I
ENSMPUG00000013263 Mustela putorius furo ENSMPUG00000013263 I
ENSMPUG00000015153 Mustela putorius furo ENSMPUG00000015153 I
ENSMPUG00000015840 Mustela putorius furo ENSMPUG00000015840 N
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I
ENSNLEG00000013634 Nomascus leucogenys ENSNLEG00000013634 I
ENSOARG00000006636 Ovis aries ENSOARG00000006636 N
ENSOARG00000015298 Ovis aries ENSOARG00000015298 I
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I
ENSONIG00000002710 Oreochromis niloticus ENSONIG00000002710 I
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I
ENSP00000251808-D1 Bos grunniens ENSP00000251808-D1 I
ENSP00000288955 Macaca fascicularis ENSP00000288955 N
ENSP00000379261 Macaca fascicularis ENSP00000379261 I
ENSP00000384209-D1 Bos grunniens ENSP00000384209-D1 I
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I
ENSPANG00000020814 Papio anubis ENSPANG00000020814 I
ENSPANG00000024748 Papio anubis ENSPANG00000024748 N
ENSPFOG00000004774 Poecilia formosa ENSPFOG00000004774 I
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I
ENSPFOG00000010589 Poecilia formosa ENSPFOG00000010589 N
ENSPMAG00000005869 Petromyzon marinus ENSPMAG00000005869 I
ENSPMAG00000005876 Petromyzon marinus ENSPMAG00000005876 I
ENSPPYG00000001721 Pongo abelii ENSPPYG00000001721 N
ENSPPYG00000012661 Pongo abelii ENSPPYG00000012661 I
ENSPPYG00000018794 Pongo abelii ENSPPYG00000018794 I
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I
ENSSHAG00000015849 Sarcophilus harrisii ENSSHAG00000015849 I
ENSSTOG00000001498 Ictidomys tridecemlineatus ENSSTOG00000001498 I
ENSSTOG00000002434 Ictidomys tridecemlineatus ENSSTOG00000002434 I
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I
ENSSTOG00000023529 Ictidomys tridecemlineatus ENSSTOG00000023529 N
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I
Gfo_R006019 Geospiza fortis Gfo_R006019 I
Gfo_R011603 Geospiza fortis Gfo_R011603 N
Gfo_R015266 Geospiza fortis Gfo_R015266 I
GRHL1 Anolis carolinensis ENSACAG00000000132 I
GRHL1 Bos taurus ENSBTAG00000007485 I
GRHL1 Canis familiaris ENSCAFG00000003394 I
GRHL1 Callithrix jacchus ENSCJAG00000006431 I
GRHL1 Cavia porcellus ENSCPOG00000010783 I
grhl1 Danio rerio ENSDARG00000061391 I
GRHL1 Dasypus novemcinctus ENSDNOG00000014493 I
GRHL1 Equus caballus ENSECAG00000015969 I
GRHL1 Felis catus ENSFCAG00000007856 I
GRHL1 Homo sapiens ENSG00000134317 D
grhl1 Gasterosteus aculeatus ENSGACG00000008845 I
GRHL1 Gorilla gorilla ENSGGOG00000002692 I
GRHL1 Loxodonta africana ENSLAFG00000009330 I
GRHL1 Meleagris gallopavo ENSMGAG00000014007 I
GRHL1 Myotis lucifugus ENSMLUG00000002290 I
GRHL1 Macaca mulatta ENSMMUG00000001535 I
GRHL1 Monodelphis domestica ENSMODG00000014753 I
Grhl1 Mus musculus ENSMUSG00000020656 I
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I
GRHL1 Oryctolagus cuniculus ENSOCUG00000017717 I
GRHL1 Otolemur garnettii ENSOGAG00000014342 I
grhl1 Oryzias latipes ENSORLG00000015232 I
GRHL1 Pan troglodytes ENSPTRG00000011643 I
GRHL1 Pteropus vampyrus ENSPVAG00000002002 I
Grhl1 Rattus norvegicus ENSRNOG00000054989 I
GRHL1 Taeniopygia guttata ENSTGUG00000013038 I
grhl1 Tetraodon nigroviridis ENSTNIG00000017317 I
grhl1 Takifugu rubripes ENSTRUG00000013628 I
GRHL1 Vicugna pacos ENSVPAG00000010842 I
grhl1.L Xenopus laevis XB-GENE-486580 I
GRHL2 Anolis carolinensis ENSACAG00000008759 I
GRHL2 Bos taurus ENSBTAG00000004518 I
GRHL2 Canis familiaris ENSCAFG00000000587 I
GRHL2 Callithrix jacchus ENSCJAG00000015886 I
GRHL2 Cavia porcellus ENSCPOG00000005630 I
GRHL2 Dasypus novemcinctus ENSDNOG00000048641 I
GRHL2 Equus caballus ENSECAG00000013681 I
GRHL2 Erinaceus europaeus ENSEEUG00000015263 I
GRHL2 Felis catus ENSFCAG00000004963 I
GRHL2 Homo sapiens ENSG00000083307 D
GRHL2 Gorilla gorilla ENSGGOG00000004401 I
GRHL2 Loxodonta africana ENSLAFG00000010356 I
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I
GRHL2 Microcebus murinus ENSMICG00000014771 I
GRHL2 Myotis lucifugus ENSMLUG00000010961 I
GRHL2 Macaca mulatta ENSMMUG00000020995 I
GRHL2 Monodelphis domestica ENSMODG00000006048 I
Grhl2 Mus musculus ENSMUSG00000022286 D
GRHL2 Ornithorhynchus anatinus ENSOANG00000004305 I
GRHL2 Oryctolagus cuniculus ENSOCUG00000004750 I
GRHL2 Otolemur garnettii ENSOGAG00000004751 I
GRHL2 Pan troglodytes ENSPTRG00000020479 I
Grhl2 Rattus norvegicus ENSRNOG00000007000 I
GRHL2 Sus scrofa ENSSSCG00000006060 I
GRHL2 Tursiops truncatus ENSTTRG00000005794 I
grhl2 Xenopus tropicalis XB-GENE-485995 I
grhl2a Danio rerio ENSDARG00000058342 I
grhl2a Gasterosteus aculeatus ENSGACG00000003655 I
grhl2a Oryzias latipes ENSORLG00000002613 N
grhl2a Tetraodon nigroviridis ENSTNIG00000013309 I
grhl2a Takifugu rubripes ENSTRUG00000011936 N
grhl2b Danio rerio ENSDARG00000061974 I
grhl2b Takifugu rubripes ENSTRUG00000002119 I
GRHL3 Anolis carolinensis ENSACAG00000017262 N
GRHL3 Bos taurus ENSBTAG00000019791 N
Grhl3 Dipodomys ordii ENSDORG00000001381 N
GRHL3 Equus caballus ENSECAG00000009866 N
GRHL3 Homo sapiens ENSG00000158055 N
GRHL3 Gorilla gorilla ENSGGOG00000001792 N
GRHL3 Loxodonta africana ENSLAFG00000001618 N
GRHL3 Microcebus murinus ENSMICG00000000542 N
Grhl3 Mus musculus ENSMUSG00000037188 N
GRHL3 Procavia capensis ENSPCAG00000011355 N
GRHL3 Pan troglodytes ENSPTRG00000000344 N
GRHL3 Sus scrofa ENSSSCG00000003539 N
GRHL3 Taeniopygia guttata ENSTGUG00000001153 N
Myotis_brandtii_GRHL1_10020834 Myotis brandtii Myotis_brandtii_GRHL1_10020834 I
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I
Myotis_brandtii_Grhl3_10029711 Myotis brandtii Myotis_brandtii_Grhl3_10029711 N
nDi.2.2.2.g12300 Dirofilaria immitis nDi.2.2.2.g12300 I
Ogr04284 Ophisaurus gracilis Ogr04284 I
Pvit_03833 Pogona vitticeps Pvit_03833 I
Tal_R005479 Tyto alba Tal_R005479 N
Tal_R012680 Tyto alba Tal_R012680 I
XP_002938935 Xenopus tropicalis XP_002938935 I
XP_002938936 Xenopus tropicalis XP_002938936 I