|
NDAI_0A06440
(Naumovozyma dairenensis)
C2H2 ZF
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
Animal TF db |
PF00096 (zf-C2H2) |
IPR007087 |
NDAI_0A06440 |
T124024_2.00 |
Ensembl (2018-Dec-8) |
Link out |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
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Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
RPN4
M00017_2.00 |
Saccharomyces cerevisiae |
NNCGCCACCN |
NGGTGGCGNN |
PBM
Badis et al.(2008)
RPN4_2137
|
0.827
|
0.976
|
RPN4
M01525_2.00 |
Saccharomyces cerevisiae |
NWWWWWWWWN |
NWWWWWWWWN |
PBM
Zhu et al.(2009)
Rpn4
|
0.827
|
0.976
|
RPN4
M07447_2.00 |
Saccharomyces cerevisiae |
CGCCACY |
RGTGGCG |
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0373.1
|
0.827
|
0.976
|
RPN4
M08511_2.00 |
Saccharomyces cerevisiae |
NNNRGTGGCRAM |
KTYGCCACYNNN |
Misc
DeBoer et al.(2011)
YDL020C_1700
|
0.827
|
0.976
|
For this family, TFs with SR scores > 0.755 will likely have a similar motif |