3988_YDL020C (Saccharomyces bayanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 3988_YDL020C T145980_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RPN4
M00017_2.00 		Saccharomyces cerevisiae
NNCGCCACCN
NGGTGGCGNN		 PBM
Badis et al.(2008)
RPN4_2137 		0.827 1.000
RPN4
M01525_2.00 		Saccharomyces cerevisiae
NWWWWWWWWN
NWWWWWWWWN		 PBM
Zhu et al.(2009)
Rpn4 		0.827 1.000
RPN4
M07447_2.00 		Saccharomyces cerevisiae
CGCCACY
RGTGGCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0373.1 		0.827 1.000
RPN4
M08511_2.00 		Saccharomyces cerevisiae
NNNRGTGGCRAM
KTYGCCACYNNN		 Misc
DeBoer et al.(2011)
YDL020C_1700 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
3988_YDL020C C2H2 ZF 454 472
3988_YDL020C C2H2 ZF 479 511

Links

Other C2H2 ZF family TFs
Other Saccharomyces bayanus TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KAFR_0F02260 Kazachstania africana KAFR_0F02260 I 0.827
NCAS_0I01820 Naumovozyma castellii NCAS_0I01820 I 0.827
NDAI_0A06440 Naumovozyma dairenensis NDAI_0A06440 I 0.827
SKUD_186708 Saccharomyces kudriavzevii SKUD_186708 I 0.827
TDEL_0D04500 Torulaspora delbrueckii TDEL_0D04500 I 0.827
RPN4 Saccharomyces cerevisiae YDL020C D 0.827
ZBAI_02149 Zygosaccharomyces bailii ZBAI_02149 I 0.827
ZBAI_08006 Zygosaccharomyces bailii ZBAI_08006 I 0.827
ZYRO0A05302g Zygosaccharomyces rouxii ZYRO0A05302g I 0.827
Scas_Contig718.67 Saccharomyces castellii Scas_Contig718.67 I 0.827
3679_YDL020C Saccharomyces paradoxus 3679_YDL020C I 0.827
3158_YDL020C Saccharomyces mikatae 3158_YDL020C I 0.821
TPHA_0H00790 Tetrapisispora phaffii TPHA_0H00790 I 0.797
KNAG_0K01703 Kazachstania naganishii KNAG_0K01703 I 0.786
KAFR_0C00960 Kazachstania africana KAFR_0C00960 I 0.776