CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZBAI_02149
(
Zygosaccharomyces bailii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ZBAI_02149
T132242_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RPN4
M00017_2.00
Saccharomyces cerevisiae
NNCGCCACCN
NGGTGGCGNN
PBM
Badis et al.(2008)
RPN4_2137
0.827
0.976
RPN4
M01525_2.00
Saccharomyces cerevisiae
NWWWWWWWWN
NWWWWWWWWN
PBM
Zhu et al.(2009)
Rpn4
0.827
0.976
RPN4
M07447_2.00
Saccharomyces cerevisiae
CGCCACY
RGTGGCG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0373.1
0.827
0.976
RPN4
M08511_2.00
Saccharomyces cerevisiae
NNNRGTGGCRAM
KTYGCCACYNNN
Misc
DeBoer et al.(2011)
YDL020C_1700
0.827
0.976
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CDH10364
C2H2 ZF
354
372
CSAQFSRSYDLTRHQNTIH
CDH10364
C2H2 ZF
379
411
FRCSECIRMLGHEGYQKTFSRLDALTRHIKSKH
Links
Other
C2H2 ZF
family TFs
Other
Zygosaccharomyces bailii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KAFR_0F02260
Kazachstania africana
KAFR_0F02260
I
0.827
NCAS_0I01820
Naumovozyma castellii
NCAS_0I01820
I
0.827
NDAI_0A06440
Naumovozyma dairenensis
NDAI_0A06440
I
0.827
SKUD_186708
Saccharomyces kudriavzevii
SKUD_186708
I
0.827
TDEL_0D04500
Torulaspora delbrueckii
TDEL_0D04500
I
0.827
RPN4
Saccharomyces cerevisiae
YDL020C
D
0.827
ZBAI_08006
Zygosaccharomyces bailii
ZBAI_08006
I
0.827
ZYRO0A05302g
Zygosaccharomyces rouxii
ZYRO0A05302g
I
0.827
Scas_Contig718.67
Saccharomyces castellii
Scas_Contig718.67
I
0.827
3679_YDL020C
Saccharomyces paradoxus
3679_YDL020C
I
0.827
3988_YDL020C
Saccharomyces bayanus
3988_YDL020C
I
0.827
3158_YDL020C
Saccharomyces mikatae
3158_YDL020C
I
0.821
TPHA_0H00790
Tetrapisispora phaffii
TPHA_0H00790
I
0.797
KNAG_0K01703
Kazachstania naganishii
KNAG_0K01703
I
0.786
KAFR_0C00960
Kazachstania africana
KAFR_0C00960
I
0.776