OB03G22700 (Oryza brachyantha)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OB03G22700 T124579_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.766 0.756
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.766 0.756
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.756 0.756
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB03G22700.1 C2H2 ZF 55 75
OB03G22700.1 C2H2 ZF 102 122

Links

Other C2H2 ZF family TFs
Other Oryza brachyantha TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04223 Aegilops tauschii F775_04223 I
F775_23176 Aegilops tauschii F775_23176 N
F775_43210 Aegilops tauschii F775_43210 I
F775_52426 Aegilops tauschii F775_52426 N
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I
PGSC0003DMG400045423 Solanum tuberosum PGSC0003DMG400045423 N
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I