OB11G27860 (Oryza brachyantha)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OB11G27860 T124607_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.773 0.696
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.773 0.696
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.772 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB11G27860.1 C2H2 ZF 46 68
OB11G27860.1 C2H2 ZF 101 123

Links

Other C2H2 ZF family TFs
Other Oryza brachyantha TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_188638 Agaricus bisporus AGABI2DRAFT_188638 N
BN946_scf185015.g92 Trametes cinnabarina BN946_scf185015.g92 N
BOTBODRAFT_37556 Botryobasidium botryosum BOTBODRAFT_37556 N
CC1G_01334 Coprinopsis cinerea CC1G_01334 N
CERSUDRAFT_111079 Ceriporiopsis subvermispora CERSUDRAFT_111079 N
CNA04270 Cryptococcus neoformans CNA04270 N
CY34DRAFT_800204 Suillus luteus CY34DRAFT_800204 N
DICSQDRAFT_161203 Dichomitus squalens DICSQDRAFT_161203 N
fgenesh2_pg.C_scaffold_4000344 Heterobasidion annosum fgenesh2_pg.C_scaffold_4000344 N
FIBRA_08488 Fibroporia radiculosa FIBRA_08488 N
GALMADRAFT_236555 Galerina marginata GALMADRAFT_236555 N
GLOTRDRAFT_70334 Gloeophyllum trabeum GLOTRDRAFT_70334 N
HETIRDRAFT_237963 Heterobasidion irregulare HETIRDRAFT_237963 N
JAAARDRAFT_116407 Jaapia argillacea JAAARDRAFT_116407 N
K443DRAFT_675725 Laccaria amethystina K443DRAFT_675725 N
L804_02037 Cryptococcus gattii L804_02037 N
LACBIDRAFT_311571 Laccaria bicolor LACBIDRAFT_311571 N
M378DRAFT_156363 Amanita muscaria M378DRAFT_156363 N
M404DRAFT_124276 Pisolithus tinctorius M404DRAFT_124276 N
M408DRAFT_308571 Serendipita vermifera M408DRAFT_308571 N
M408DRAFT_74753 Serendipita vermifera M408DRAFT_74753 N
M413DRAFT_65005 Hebeloma cylindrosporum M413DRAFT_65005 N
Moror_13892 Moniliophthora roreri Moror_13892 N
PAXRUDRAFT_129737 Paxillus rubicundulus PAXRUDRAFT_129737 N
PHACADRAFT_249698 Phanerochaete carnosa PHACADRAFT_249698 N
PHLGIDRAFT_81249 Phlebiopsis gigantea PHLGIDRAFT_81249 N
PIIN_05647 Piriformospora indica PIIN_05647 N
PILCRDRAFT_32440 Piloderma croceum PILCRDRAFT_32440 N
PISMIDRAFT_89773 Pisolithus microcarpus PISMIDRAFT_89773 N
PLEOSDRAFT_27233 Pleurotus ostreatus PLEOSDRAFT_27233 N
SCHCODRAFT_255141 Schizophyllum commune SCHCODRAFT_255141 N
SCLCIDRAFT_1209153 Scleroderma citrinum SCLCIDRAFT_1209153 N
SERLA73DRAFT_177720 Serpula lacrymans SERLA73DRAFT_177720 N
V565_038130 Rhizoctonia solani V565_038130 N