PHUM248360 (Pediculus humanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PHUM248360 T126143_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF11
M00242_2.00 		Homo sapiens
MCGCCCCC
GGGGGCGK		 PBM
Barrera et al.(2016)
KLF11_REF 		0.777 0.725
KLF11
M04554_2.00 		Homo sapiens
VMCMCRCCCMYNMCACGCCCMC
GKGGGCGTGKNRKGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX 		0.777 0.725
KLF11
M10261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKLF_Q5 		0.777 0.725
KLF11
M00241_2.00 		Homo sapiens
MCGCCCMC
GKGGGCGK		 PBM
Barrera et al.(2016)
KLF11_R402Q 		0.777 0.725
KLF11
M04555_2.00 		Homo sapiens
VMCMCRCCCHYNHCACGCCCMC
GKGGGCGTGDNRDGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX 		0.777 0.725
KLF10
M04489_2.00 		Homo sapiens
RMCACRCCCMYVHCACRCCCMC
GKGGGYGTGDBRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX 		0.774 0.725
KLF10
M08246_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 ChIP-seq
Najafabadi et al.(2015b)
KLF10 		0.774 0.725
KLF10
M08317_2.00 		Homo sapiens
SMCMCRCCCMYNBSN
NSVNRKGGGYGKGKS		 ChIP-seq
Schmitges et al.(2016)
Q13118.MEME 		0.774 0.725
KLF10
M10228_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TIEG1_Q6 		0.774 0.725
KLF10
M04490_2.00 		Homo sapiens
RMCACRCCCMYGMCACRCCCHC
GDGGGYGTGKCRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX 		0.774 0.725
KLF13
M02903_2.00 		Homo sapiens
DDRMCACGCCCCYTTNDK
MHNAARGGGGCGTGKYHH		 SELEX
Jolma et al.(2013)
KLF13_1 		0.756 0.681
KLF13
M04537_2.00 		Homo sapiens
NRCCACRCCCMCN
NGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_eDBD_HT-SELEX 		0.756 0.681
KLF13
M04539_2.00 		Homo sapiens
NRCCACRCCCMYN
NRKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_FL_HT-SELEX 		0.756 0.681
KLF13
M04538_2.00 		Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_eDBD_Methyl-HT-SELEX 		0.756 0.681
KLF13
M04540_2.00 		Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN		 SELEX
Yin et al.(2017)
KLF13_FL_Methyl-HT-SELEX 		0.756 0.681
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PHUM248360-PA C2H2 ZF 192 216
PHUM248360-PA C2H2 ZF 222 246
PHUM248360-PA C2H2 ZF 252 274

Links

Other C2H2 ZF family TFs
Other Pediculus humanus TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000742 Ricinus communis 29814.m000742 N
Aquca_045_00193 Aquilegia coerulea Aquca_045_00193 N
Bo5g136860 Brassica oleracea Bo5g136860 N
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N
Bra034867 Brassica rapa Bra034867 N
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N
Carubv10015898m.g Capsella rubella Carubv10015898m.g N
cassava20837.m1 Manihot esculenta cassava20837.m1 N
cassava41267.m1 Manihot esculenta cassava41267.m1 N
Ca_12464 Cicer arietinum Ca_12464 N
chr6.LjB02K20.190.nd Lotus japonicus chr6.LjB02K20.190.nd N
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N
Cucsa.136740 Cucumis sativus Cucsa.136740 N
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N
gene21008-v1.0-hybrid Fragaria vesca gene21008-v1.0-hybrid N
GLYMA02G43220 Glycine max GLYMA02G43220 N
GLYMA11G35500 Glycine max GLYMA11G35500 N
GLYMA14G06270 Glycine max GLYMA14G06270 N
GLYMA18G02910 Glycine max GLYMA18G02910 N
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N
LBD21 Vitis vinifera VIT_13s0067g01450 N
LBD21 Arabidopsis thaliana AT3G11090 N
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N
Lus10028986.g Linum usitatissimum Lus10028986.g N
MDP0000220708 Malus domestica MDP0000220708 N
MDP0000943252 Malus domestica MDP0000943252 N
mgf019866m Mimulus guttatus mgf019866m N
MTR_3g071420 Medicago truncatula MTR_3g071420 N
MTR_5g083010 Medicago truncatula MTR_5g083010 N
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N
PGSC0003DMG400027718 Solanum tuberosum PGSC0003DMG400027718 N
PK29334.1 Cannabis sativa PK29334.1 I
Pm018957 Prunus mume Pm018957 N
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N
TCM_042466 Theobroma cacao TCM_042466 N
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N