POPTR_0012s09390 (Populus trichocarpa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 POPTR_0012s09390 T126836_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s09390.1 C2H2 ZF 1556 1579
POPTR_0012s09390.1 C2H2 ZF 1580 1603
POPTR_0012s09390.1 C2H2 ZF 1639 1665

Links

Other C2H2 ZF family TFs
Other Populus trichocarpa TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m013814 Ricinus communis 30147.m013814 N 0.781
Aquca_011_00361 Aquilegia coerulea Aquca_011_00361 N 0.801
cassava3225.m1 Manihot esculenta cassava3225.m1 N 0.777
Ca_08787 Cicer arietinum Ca_08787 N 0.768
Ciclev10018473m.g Citrus clementina Ciclev10018473m.g N 0.790
Cucsa.391680 Cucumis sativus Cucsa.391680 N 0.810
Eucgr.K02763 Eucalyptus grandis Eucgr.K02763 N 0.760
evm.TU.supercontig_4.49 Carica papaya evm.TU.supercontig_4.49 N 0.798
GLYMA04G36630 Glycine max GLYMA04G36630 N 0.764
GLYMA06G18300 Glycine max GLYMA06G18300 N 0.757
Gorai.006G270100 Gossypium raimondii Gorai.006G270100 N 0.806
Lus10043332.g Linum usitatissimum Lus10043332.g N 0.768
PGSC0003DMG400015167 Solanum tuberosum PGSC0003DMG400015167 N 0.756
POPTR_0015s10040 Populus trichocarpa POPTR_0015s10040 N 0.781
SapurV1A.0486s0080 Salix purpurea SapurV1A.0486s0080 N 0.781
Solyc03g111590.2 Solanum lycopersicum Solyc03g111590.2 N 0.756
TCM_014549 Theobroma cacao TCM_014549 N 0.813