CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV08_02892
(
Exophiala spinifera
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV08_02892
T127565_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU07952
M01890_2.00
Neurospora crassa
YWNMGCCHY
RDGGCKNWR
PBM
Weirauch et al.(2014)
pTH9003
0.788
0.912
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW18603
C2H2 ZF
462
484
FQCNLCPKRFTRAYNLRSHLRTH
KIW18603
C2H2 ZF
490
512
FVCTVCGKAFARQHDRKRHEGLH
KIW18603
C2H2 ZF
518
550
FVCKGELHSNPGQYWGCGRRFARADALGRHFRS
Links
Other
C2H2 ZF
family TFs
Other
Exophiala spinifera
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30169.m006225
Ricinus communis
30169.m006225
N
cassava18974.valid.m1
Manihot esculenta
cassava18974.valid.m1
N
cassava7265.valid.m1
Manihot esculenta
cassava7265.valid.m1
N
Gorai.006G050200
Gossypium raimondii
Gorai.006G050200
N
Gorai.007G012300
Gossypium raimondii
Gorai.007G012300
N
POPTR_0004s07700
Populus trichocarpa
POPTR_0004s07700
N
SapurV1A.0147s0170
Salix purpurea
SapurV1A.0147s0170
N
SapurV1A.1012s0040
Salix purpurea
SapurV1A.1012s0040
N
TCM_015228
Theobroma cacao
TCM_015228
N