CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb02g020840
(
Sorghum bicolor
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Sb02g020840
T128213_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb02g020840.1
C2H2 ZF
271
292
YACRRCGKRFAVRGDWRTHEKN
Sb02g020840.1
C2H2 ZF
291
317
KNCGKLWFCVCGSDFKHKRSLKDHVRS
Links
Other
C2H2 ZF
family TFs
Other
Sorghum bicolor
TFs
218 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28650.m000187
Ricinus communis
28650.m000187
N
0.000
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.000
Ciclev10027926m.g
Citrus clementina
Ciclev10027926m.g
N
0.000
Ciclev10027940m.g
Citrus clementina
Ciclev10027940m.g
N
0.000
evm.TU.supercontig_81.122
Carica papaya
evm.TU.supercontig_81.122
N
0.000
orange1.1g045079m.g
Citrus sinensis
orange1.1g045079m.g
N
0.000
POPTR_0009s03850
Populus trichocarpa
POPTR_0009s03850
N
0.000
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.000
PRUPE_ppa026849mg
Prunus persica
PRUPE_ppa026849mg
N
0.000