CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si010000m.g
(
Setaria italica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Si010000m.g
T128660_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si010000m
C2H2 ZF
320
342
YTCSRCHTKKFSVMADLKTHEKH
Si010000m
C2H2 ZF
343
368
CGRDKWLCSCGTSFTRKDKLFAHVAL
Links
Other
C2H2 ZF
family TFs
Other
Setaria italica
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA037065
Oryza indica
BGIOSGA037065
N
0.798
LPERR12G04020
Leersia perrieri
LPERR12G04020
N
0.798
OB12G14220
Oryza brachyantha
OB12G14220
N
0.774
OGLUM12G05080
Oryza glumaepatula
OGLUM12G05080
N
0.798
ONIVA12G03970
Oryza nivara
ONIVA12G03970
N
0.798
OPUNC12G04340
Oryza punctata
OPUNC12G04340
N
0.798
ORGLA12G0040600
Oryza glaberrima
ORGLA12G0040600
N
0.798
ORUFI12G04900
Oryza rufipogon
ORUFI12G04900
N
0.798
Pavir.Cb01989
Panicum virgatum
Pavir.Cb01989
N
0.827
Pavir.J02020
Panicum virgatum
Pavir.J02020
N
0.827
STAR3
Oryza sativa
OS12G0170400
N
0.798