Alligator_sinensis_CCG012135.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG012135.1 T133290_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG012135.1 C2H2 ZF 351 376
Alligator_sinensis_CCG012135.1 C2H2 ZF 385 412

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA018468 Oryza indica BGIOSGA018468 N 0.000
BGIOSGA020445 Oryza indica BGIOSGA020445 N 0.000
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 0.000
BRADI1G09650 Brachypodium distachyon BRADI1G09650 N 0.000
BRADI1G09660 Brachypodium distachyon BRADI1G09660 N 0.000
BRADI3G16050 Brachypodium distachyon BRADI3G16050 N 0.000
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.000
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.000
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.000
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.000
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.000
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.000
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.000
GLYMA16G32921 Glycine max GLYMA16G32921 N 0.000
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.000
GSMUA_Achr10G16260_001 Musa acuminata GSMUA_Achr10G16260_001 N 0.000
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.000
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.000
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.000
HAT Arabidopsis thaliana AT3G42170 N 0.000
Lus10032337.g Linum usitatissimum Lus10032337.g N 0.000
MDP0000394762 Malus domestica MDP0000394762 N 0.000
mgf025287m Mimulus guttatus mgf025287m N 0.000
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.000
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.000
OB03G40190 Oryza brachyantha OB03G40190 N 0.000
OB08G27840 Oryza brachyantha OB08G27840 N 0.000
OB08G27850 Oryza brachyantha OB08G27850 N 0.000
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.000
ORGLA03G0300400 Oryza glaberrima ORGLA03G0300400 N 0.000
ORGLA05G0072400 Oryza glaberrima ORGLA05G0072400 N 0.000
ORGLA05G0236800 Oryza glaberrima ORGLA05G0236800 N 0.000
ORGLA05G0237000 Oryza glaberrima ORGLA05G0237000 N 0.000
OS03G0733400 Oryza sativa OS03G0733400 N 0.000
OS05G0583200 Oryza sativa OS05G0583200 N 0.000
Pavir.Ea02468 Panicum virgatum Pavir.Ea02468 N 0.000
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.000
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.000
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.000
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.000
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.000
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.000
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.000
PK27100.1 Cannabis sativa PK27100.1 N 0.000
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.000
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.000
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.000
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.000
Sb08g005330 Sorghum bicolor Sb08g005330 N 0.000
Si000431m.g Setaria italica Si000431m.g N 0.000
Si034159m.g Setaria italica Si034159m.g N 0.000
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.000
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.000
TCM_038144 Theobroma cacao TCM_038144 N 0.000
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.000
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.000
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.000
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.000
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.000
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.000
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.000