CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10004697
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10004697
T134255_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfp740
M00784_2.00
Mus musculus
MCCCCCCNHN
NDNGGGGGGK
PBM
Weirauch et al.(2013)
pTH2857
0.823
0.926
Zfp740
M00143_2.00
Mus musculus
HMCCCCCNNN
NNNGGGGGKD
PBM
Badis et al.(2009)
Zfp740_0925
0.823
0.926
Zfp740
M02935_2.00
Mus musculus
NCCCCCCCAH
DTGGGGGGGN
SELEX
Jolma et al.(2013)
Zfp740_1
0.823
0.926
ZNF740
M02891_2.00
Homo sapiens
VCCCCCCCMY
RKGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_1
0.807
0.926
ZNF740
M02892_2.00
Homo sapiens
VCCCCCCCAY
RTGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_2
0.807
0.926
ZNF740
M04467_2.00
Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX
0.807
0.926
ZNF740
M04469_2.00
Homo sapiens
NYNCCCCCCCCAC
GTGGGGGGGGNRN
SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX
0.807
0.926
ZNF740
M10221_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF740_02
0.807
0.926
ZNF740
M04468_2.00
Homo sapiens
YYDCCCCCCCCAY
RTGGGGGGGGHRR
SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX
0.807
0.926
ZNF740
M04470_2.00
Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX
0.807
0.926
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10004697
C2H2 ZF
101
123
FICEHCYGAFRSSYHLKRHILIH
Cmyd_10004697
C2H2 ZF
129
151
FECDLCDMRFIQKYHLERHKRVH
Cmyd_10004697
C2H2 ZF
157
178
YQCERCMQSFSRTDRLLRHKRM
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG005405.1
Alligator sinensis
Alligator_sinensis_CCG005405.1
I
0.823
ENSAMEG00000012221
Ailuropoda melanoleuca
ENSAMEG00000012221
I
0.823
ENSAMXG00000004859
Astyanax mexicanus
ENSAMXG00000004859
I
0.771
ENSBTAG00000016502
Bos taurus
ENSBTAG00000016502
I
0.801
ENSBTAG00000046481
Bos taurus
ENSBTAG00000046481
I
0.807
ENSBTAP00000021935-D1
Bos grunniens
ENSBTAP00000021935-D1
I
0.807
ENSBTAP00000048192-D3
Bos grunniens
ENSBTAP00000048192-D3
I
0.807
ENSCPOG00000014815
Cavia porcellus
ENSCPOG00000014815
I
0.823
ENSCSAG00000005533
Chlorocebus sabaeus
ENSCSAG00000005533
I
0.785
ENSDORG00000002972
Dipodomys ordii
ENSDORG00000002972
I
0.823
ENSFALG00000004356
Ficedula albicollis
ENSFALG00000004356
I
0.820
ENSGALG00000026752
Gallus gallus
ENSGALG00000026752
I
0.819
ENSMEUG00000003745
Macropus eugenii
ENSMEUG00000003745
I
0.819
ENSMMUP00000006945
Macaca fascicularis
ENSMMUP00000006945
I
0.807
ENSNLEG00000017717
Nomascus leucogenys
ENSNLEG00000017717
I
0.807
ENSPANG00000018242
Papio anubis
ENSPANG00000018242
I
0.807
ENSPFOG00000001757
Poecilia formosa
ENSPFOG00000001757
I
0.758
ENSPPYG00000004570
Pongo abelii
ENSPPYG00000004570
I
0.807
ENSPSIG00000003019
Pelodiscus sinensis
ENSPSIG00000003019
I
0.823
ENSSHAG00000000623
Sarcophilus harrisii
ENSSHAG00000000623
I
0.819
ENSSSCG00000000256
Sus scrofa
ENSSSCG00000000256
I
0.807
ENSSTOG00000011188
Ictidomys tridecemlineatus
ENSSTOG00000011188
I
0.823
ENSTSYG00000010942
Tarsius syrichta
ENSTSYG00000010942
I
0.807
Gfo_R004393
Geospiza fortis
Gfo_R004393
I
0.820
Myotis_brandtii_ZNF740_10023006
Myotis brandtii
Myotis_brandtii_ZNF740_10023006
I
0.807
Zfp740
Mus musculus
ENSMUSG00000046897
D
0.823
ZNF740
Otolemur garnettii
ENSOGAG00000025330
I
0.807
znf740
Xenopus tropicalis
XB-GENE-1219010
I
0.803
ZNF740
Canis familiaris
ENSCAFG00000007070
I
0.823
ZNF740
Callithrix jacchus
ENSCJAG00000018381
I
0.807
ZNF740
Dasypus novemcinctus
ENSDNOG00000033888
I
0.823
ZNF740
Equus caballus
ENSECAG00000013071
I
0.807
ZNF740
Echinops telfairi
ENSETEG00000006127
I
0.823
ZNF740
Tursiops truncatus
ENSTTRG00000002776
I
0.807
ZNF740
Felis catus
ENSFCAG00000005868
I
0.823
ZNF740
Tupaia belangeri
ENSTBEG00000015437
I
0.823
ZNF740
Homo sapiens
ENSG00000139651
D
0.807
ZNF740
Gorilla gorilla
ENSGGOG00000006790
I
0.807
ZNF740
Loxodonta africana
ENSLAFG00000009191
I
0.820
ZNF740
Sorex araneus
ENSSARG00000012946
I
0.807
Znf740
Rattus norvegicus
ENSRNOG00000012192
I
0.823
ZNF740
Pan troglodytes
ENSPTRG00000005005
I
0.807
ZNF740
Microcebus murinus
ENSMICG00000014191
I
0.791
ZNF740
Myotis lucifugus
ENSMLUG00000017275
I
0.807
ZNF740
Macaca mulatta
ENSMMUG00000005246
I
0.807
ZNF740
Anolis carolinensis
ENSACAG00000006993
I
0.823
ZNF740
Oryctolagus cuniculus
ENSOCUG00000001422
I
0.807
znf740.S
Xenopus laevis
XB-GENE-1219015
I
0.803
znf740b
Danio rerio
ENSDARG00000061174
I
0.771