Cmyd_10004697 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10004697 T134255_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp740
M00784_2.00 		Mus musculus
MCCCCCCNHN
NDNGGGGGGK		 PBM
Weirauch et al.(2013)
pTH2857 		0.823 0.926
Zfp740
M00143_2.00 		Mus musculus
HMCCCCCNNN
NNNGGGGGKD		 PBM
Badis et al.(2009)
Zfp740_0925 		0.823 0.926
Zfp740
M02935_2.00 		Mus musculus
NCCCCCCCAH
DTGGGGGGGN		 SELEX
Jolma et al.(2013)
Zfp740_1 		0.823 0.926
ZNF740
M02891_2.00 		Homo sapiens
VCCCCCCCMY
RKGGGGGGGB		 SELEX
Jolma et al.(2013)
ZNF740_1 		0.807 0.926
ZNF740
M02892_2.00 		Homo sapiens
VCCCCCCCAY
RTGGGGGGGB		 SELEX
Jolma et al.(2013)
ZNF740_2 		0.807 0.926
ZNF740
M04467_2.00 		Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN		 SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX 		0.807 0.926
ZNF740
M04469_2.00 		Homo sapiens
NYNCCCCCCCCAC
GTGGGGGGGGNRN		 SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX 		0.807 0.926
ZNF740
M10221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF740_02 		0.807 0.926
ZNF740
M04468_2.00 		Homo sapiens
YYDCCCCCCCCAY
RTGGGGGGGGHRR		 SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX 		0.807 0.926
ZNF740
M04470_2.00 		Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN		 SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX 		0.807 0.926
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10004697 C2H2 ZF 101 123
Cmyd_10004697 C2H2 ZF 129 151
Cmyd_10004697 C2H2 ZF 157 178

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF740 Anolis carolinensis ENSACAG00000006993 I 0.823
ENSAMEG00000012221 Ailuropoda melanoleuca ENSAMEG00000012221 I 0.823
ZNF740 Canis familiaris ENSCAFG00000007070 I 0.823
ENSCPOG00000014815 Cavia porcellus ENSCPOG00000014815 I 0.823
ZNF740 Dasypus novemcinctus ENSDNOG00000033888 I 0.823
ENSDORG00000002972 Dipodomys ordii ENSDORG00000002972 I 0.823
ZNF740 Echinops telfairi ENSETEG00000006127 I 0.823
ZNF740 Felis catus ENSFCAG00000005868 I 0.823
Zfp740 Mus musculus ENSMUSG00000046897 D 0.823
ENSPSIG00000003019 Pelodiscus sinensis ENSPSIG00000003019 I 0.823
Znf740 Rattus norvegicus ENSRNOG00000012192 I 0.823
ENSSTOG00000011188 Ictidomys tridecemlineatus ENSSTOG00000011188 I 0.823
ZNF740 Tupaia belangeri ENSTBEG00000015437 I 0.823
Alligator_sinensis_CCG005405.1 Alligator sinensis Alligator_sinensis_CCG005405.1 I 0.823
ENSFALG00000004356 Ficedula albicollis ENSFALG00000004356 I 0.820
ZNF740 Loxodonta africana ENSLAFG00000009191 I 0.820
Gfo_R004393 Geospiza fortis Gfo_R004393 I 0.820
ENSGALG00000026752 Gallus gallus ENSGALG00000026752 I 0.819
ENSMEUG00000003745 Macropus eugenii ENSMEUG00000003745 I 0.819
ENSSHAG00000000623 Sarcophilus harrisii ENSSHAG00000000623 I 0.819
ENSBTAG00000046481 Bos taurus ENSBTAG00000046481 I 0.807
ZNF740 Callithrix jacchus ENSCJAG00000018381 I 0.807
ZNF740 Equus caballus ENSECAG00000013071 I 0.807
ZNF740 Homo sapiens ENSG00000139651 D 0.807
ZNF740 Gorilla gorilla ENSGGOG00000006790 I 0.807
ZNF740 Myotis lucifugus ENSMLUG00000017275 I 0.807
ZNF740 Macaca mulatta ENSMMUG00000005246 I 0.807
ENSNLEG00000017717 Nomascus leucogenys ENSNLEG00000017717 I 0.807
ZNF740 Oryctolagus cuniculus ENSOCUG00000001422 I 0.807
ZNF740 Otolemur garnettii ENSOGAG00000025330 I 0.807
ENSPANG00000018242 Papio anubis ENSPANG00000018242 I 0.807
ENSPPYG00000004570 Pongo abelii ENSPPYG00000004570 I 0.807
ZNF740 Pan troglodytes ENSPTRG00000005005 I 0.807
ZNF740 Sorex araneus ENSSARG00000012946 I 0.807
ENSSSCG00000000256 Sus scrofa ENSSSCG00000000256 I 0.807
ENSTSYG00000010942 Tarsius syrichta ENSTSYG00000010942 I 0.807
ZNF740 Tursiops truncatus ENSTTRG00000002776 I 0.807
ENSBTAP00000021935-D1 Bos grunniens ENSBTAP00000021935-D1 I 0.807
ENSBTAP00000048192-D3 Bos grunniens ENSBTAP00000048192-D3 I 0.807
ENSMMUP00000006945 Macaca fascicularis ENSMMUP00000006945 I 0.807
Myotis_brandtii_ZNF740_10023006 Myotis brandtii Myotis_brandtii_ZNF740_10023006 I 0.807
znf740 Xenopus tropicalis XB-GENE-1219010 I 0.803
znf740.S Xenopus laevis XB-GENE-1219015 I 0.803
ENSBTAG00000016502 Bos taurus ENSBTAG00000016502 I 0.801
ZNF740 Microcebus murinus ENSMICG00000014191 I 0.791
ENSCSAG00000005533 Chlorocebus sabaeus ENSCSAG00000005533 I 0.785
ENSAMXG00000004859 Astyanax mexicanus ENSAMXG00000004859 I 0.771
znf740b Danio rerio ENSDARG00000061174 I 0.771
ENSPFOG00000001757 Poecilia formosa ENSPFOG00000001757 I 0.758