Cmyd_10014359 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10014359 T134392_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB20
M04599_2.00 		Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX 		0.783 0.991
ZBTB20
M04600_2.00 		Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX 		0.783 0.991
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10014359 C2H2 ZF 587 609
Cmyd_10014359 C2H2 ZF 615 637
Cmyd_10014359 C2H2 ZF 643 665
Cmyd_10014359 C2H2 ZF 671 693
Cmyd_10014359 C2H2 ZF 723 745

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000009090 Ailuropoda melanoleuca ENSAMEG00000009090 I
ENSCSAG00000008583 Chlorocebus sabaeus ENSCSAG00000008583 I
ENSCSAG00000008589 Chlorocebus sabaeus ENSCSAG00000008589 I
ENSDNOG00000043806 Dasypus novemcinctus ENSDNOG00000043806 I
ENSEEUG00000008362 Erinaceus europaeus ENSEEUG00000008362 I
ENSMMUG00000008975 Macaca mulatta ENSMMUG00000008975 I
ENSMPUG00000000728 Mustela putorius furo ENSMPUG00000000728 I
ENSMPUG00000000732 Mustela putorius furo ENSMPUG00000000732 I
ENSNLEG00000001410 Nomascus leucogenys ENSNLEG00000001410 I
ENSNLEG00000001411 Nomascus leucogenys ENSNLEG00000001411 I
ENSOARG00000006935 Ovis aries ENSOARG00000006935 I
ENSOCUG00000029238 Oryctolagus cuniculus ENSOCUG00000029238 I
ENSP00000300870-D85 Bos grunniens ENSP00000300870-D85 I
ENSP00000304268-D38 Bos grunniens ENSP00000304268-D38 I
ENSP00000327143 Macaca fascicularis ENSP00000327143 I
ENSPANG00000013252 Papio anubis ENSPANG00000013252 I
ENSPANG00000013855 Papio anubis ENSPANG00000013855 I
ENSPPYG00000016111 Pongo abelii ENSPPYG00000016111 I
ENSPPYG00000016113 Pongo abelii ENSPPYG00000016113 I
ENSSTOG00000008858 Ictidomys tridecemlineatus ENSSTOG00000008858 I
ENSSTOG00000024118 Ictidomys tridecemlineatus ENSSTOG00000024118 I
Myotis_brandtii_ZNF354A_10002378 Myotis brandtii Myotis_brandtii_ZNF354A_10002378 I
Zfp354a Rattus norvegicus ENSRNOG00000003634 I
Zfp354a Mus musculus ENSMUSG00000020364 I
Zfp354a Dipodomys ordii ENSDORG00000009396 I
Zfp354b Mus musculus ENSMUSG00000020335 I
ZNF354A Bos taurus ENSBTAG00000006428 I
ZNF354A Loxodonta africana ENSLAFG00000002909 I
ZNF354A Canis familiaris ENSCAFG00000031000 I
ZNF354A Tursiops truncatus ENSTTRG00000010631 I
ZNF354A Callithrix jacchus ENSCJAG00000012077 I
ZNF354A Pteropus vampyrus ENSPVAG00000016750 I
ZNF354A Pan troglodytes ENSPTRG00000017606 I
ZNF354A Otolemur garnettii ENSOGAG00000024624 I
ZNF354A Homo sapiens ENSG00000169131 D
ZNF354A Microcebus murinus ENSMICG00000006390 I
ZNF354A Myotis lucifugus ENSMLUG00000013294 I
ZNF354A Gorilla gorilla ENSGGOG00000002534 I
ZNF354A Oryctolagus cuniculus ENSOCUG00000029378 I
ZNF354A Felis catus ENSFCAG00000023911 I
ZNF354A Equus caballus ENSECAG00000012431 I
ZNF354B Cavia porcellus ENSCPOG00000002227 I
ZNF354B Dasypus novemcinctus ENSDNOG00000031129 I
ZNF354B Pan troglodytes ENSPTRG00000017609 I
ZNF354B Pteropus vampyrus ENSPVAG00000007675 I
ZNF354B Felis catus ENSFCAG00000022066 I
ZNF354B Homo sapiens ENSG00000178338 D
Znf354b Rattus norvegicus ENSRNOG00000029678 I
ZNF354B Callithrix jacchus ENSCJAG00000018848 I
ZNF354B Gorilla gorilla ENSGGOG00000000628 I
ZNF354B Equus caballus ENSECAG00000012028 I
ZNF354B Tursiops truncatus ENSTTRG00000015932 I
ZNF354B Otolemur garnettii ENSOGAG00000027501 I
ZNF354B Canis familiaris ENSCAFG00000029114 I
ZNF354B Bos taurus ENSBTAG00000017123 I