CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ogr17257 *(Ophisaurus gracilis)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ogr17257	T136755_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
opa M03668_2.00	Drosophila melanogaster	BVCCCCCCRYNGHB	VDCNRYGGGGGGBV	SELEX Nitta et al.(2015) opa_1	0.771	0.891
opa M05861_2.00	Drosophila melanogaster	VCCCCCCRYNGNK	MNCNRYGGGGGGB	SMiLE-seq Isakova et al.(2017) Opa	0.771	0.891
opa M06468_2.00	Drosophila melanogaster	GMCCCCCCGCDG	CHGCGGGGGGKC	B1H Mathelier et al.(2014) MA0456.1	0.771	0.891
opa M06062_2.00	Drosophila melanogaster	GMCCCCCCRCDG	CHGYGGGGGGKC	B1H Zhu et al.(2011) opa_NAR_FBgn0003002	0.771	0.891
opa M06063_2.00	Drosophila melanogaster	MKVMMCCCCMCYR	YRGKGGGGKKBMK	B1H Zhu et al.(2011) Opa_SANGER_5_FBgn0003002	0.771	0.891
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ogr17257	C2H2 ZF	21	48	HVCFWEECPREGKPFKAKYKLINHIRVH
Ogr17257	C2H2 ZF	54	78	FPCPFPGCGKVFARSENLKIHKRTH
Ogr17257	C2H2 ZF	84	108	FKCEFDGCDRKFANSSDRKKHSHVH
Ogr17257	C2H2 ZF	114	138	YFCKVRGCDKSYTHPSSLRKHMKIH

Links
Other C2H2 ZF family TFs
Other *Ophisaurus gracilis* TFs