CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_16677
(
Cicer arietinum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ca_16677
T201891_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_16677
GRAS
339
714
LRNLLLLCSQSVYANDNLNANELLKQIRQHSSPFGDAPQRLAHYFANGLEARLVGDGTGVQTFYSLLSSKRISTAEFLKAYQVHLSTSPFKKFAYFFATKMILKVASKAETLHIIDFGILYGFQWPILIKFLSDREGGPPKLRITGIEFPLHGFRPMERVQETGRRLANYCKRFNVPFEFNAIASRNWEKIRVEDLKINSNEVVAVNSLMRFKNLLDESIEANSPRNAVLHLIRKINPDIFTQSIVNGSYNSPFFATRFREALFHFSAIFDMLDTVIPRENEYRMMMERESFGREAMNVVACEGLQRVERPETYKQWQVRNTRAGFKQLPLNSELMAKFRTKLRQWYHKDFVFDDDNNWMLQGWKGRILYASTCWV
Links
Other
GRAS
family TFs
Other
Cicer arietinum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_4g064150
Medicago truncatula
MTR_4g064150
N
0.880
Ca_16676
Cicer arietinum
Ca_16676
N
0.864
MTR_4g064120
Medicago truncatula
MTR_4g064120
N
0.818
GLYMA11G14720
Glycine max
GLYMA11G14720
N
0.813
MTR_4g064180
Medicago truncatula
MTR_4g064180
N
0.791
GLYMA11G14710
Glycine max
GLYMA11G14710
N
0.783
GLYMA11G14700
Glycine max
GLYMA11G14700
N
0.754
GLYMA12G06640
Glycine max
GLYMA12G06640
N
0.751
GLYMA13G41240
Glycine max
GLYMA13G41240
N
0.749
MTR_2g097410
Medicago truncatula
MTR_2g097410
N
0.747
GLYMA12G06655
Glycine max
GLYMA12G06655
N
0.743
Ca_02625
Cicer arietinum
Ca_02625
N
0.743
GLYMA15G04173
Glycine max
GLYMA15G04173
N
0.735
GLYMA11G14740
Glycine max
GLYMA11G14740
N
0.706
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
0.703
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.701