CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G06640
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA12G06640
T200208_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G06640.1
GRAS
308
678
LRNLLMMCSQSVYANDKRAANELLEQIRQHSSPSGDALQRLAHYFANGLEARLVGEGMFSFLKSKRSTAAEFLKAHQDFLSVSPFKKFTYFFANKMIMKAAVKAETVHIIDFGIQYGFQWPMLIKFLSNREGGPPKLRITGIDFPQPGFRPTEKIEETGCRLANYSKRYSIPFEYNAIASRNWETIQVEALNIETNELVAVNSLMKFENLMDETIEVDSPRNAVLHLIRKINPHIFTQCIVNGTYNAPFFTTRFREALFHFSTIYDLCDTVIPRENEWRMLIEREVLGREAMNVIACEGSERVERPETYKQWQARNMKAGFKQLPLNEELLAKFRNELRKSYHRDFVLDEDKNWMLQGWKGRILYASTCWV
GLYMA12G06640.2
GRAS
281
651
LRNLLMMCSQSVYANDKRAANELLEQIRQHSSPSGDALQRLAHYFANGLEARLVGEGMFSFLKSKRSTAAEFLKAHQDFLSVSPFKKFTYFFANKMIMKAAVKAETVHIIDFGIQYGFQWPMLIKFLSNREGGPPKLRITGIDFPQPGFRPTEKIEETGCRLANYSKRYSIPFEYNAIASRNWETIQVEALNIETNELVAVNSLMKFENLMDETIEVDSPRNAVLHLIRKINPHIFTQCIVNGTYNAPFFTTRFREALFHFSTIYDLCDTVIPRENEWRMLIEREVLGREAMNVIACEGSERVERPETYKQWQARNMKAGFKQLPLNEELLAKFRNELRKSYHRDFVLDEDKNWMLQGWKGRILYASTCWV
GLYMA12G06640.3
GRAS
281
651
LRNLLMMCSQSVYANDKRAANELLEQIRQHSSPSGDALQRLAHYFANGLEARLVGEGMFSFLKSKRSTAAEFLKAHQDFLSVSPFKKFTYFFANKMIMKAAVKAETVHIIDFGIQYGFQWPMLIKFLSNREGGPPKLRITGIDFPQPGFRPTEKIEETGCRLANYSKRYSIPFEYNAIASRNWETIQVEALNIETNELVAVNSLMKFENLMDETIEVDSPRNAVLHLIRKINPHIFTQCIVNGTYNAPFFTTRFREALFHFSTIYDLCDTVIPRENEWRMLIEREVLGREAMNVIACEGSERVERPETYKQWQARNMKAGFKQLPLNEELLAKFRNELRKSYHRDFVLDEDKNWMLQGWKGRILYASTCWV
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA11G14710
Glycine max
GLYMA11G14710
N
0.802
GLYMA11G14720
Glycine max
GLYMA11G14720
N
0.791
GLYMA11G14700
Glycine max
GLYMA11G14700
N
0.759
Ca_16677
Cicer arietinum
Ca_16677
N
0.751
MTR_4g064150
Medicago truncatula
MTR_4g064150
N
0.749
GLYMA12G06655
Glycine max
GLYMA12G06655
N
0.748
Ca_16676
Cicer arietinum
Ca_16676
N
0.733
GLYMA11G14740
Glycine max
GLYMA11G14740
N
0.725
MTR_4g064120
Medicago truncatula
MTR_4g064120
N
0.718
GLYMA13G41240
Glycine max
GLYMA13G41240
N
0.713
MTR_4g064180
Medicago truncatula
MTR_4g064180
N
0.712
GLYMA15G04173
Glycine max
GLYMA15G04173
N
0.702
Ca_02625
Cicer arietinum
Ca_02625
N
0.702
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.700