CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ca_16676
(
Cicer arietinum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ca_16676
T201890_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_16676
GRAS
56
431
LRNLLLLCSQSVYVNDTINANELLKQINQHSSPFGDATQRLSHYFANGLDARLIGDGTGAQTFFSSSSFKRITAAKFLKAYQVHYISPPFKKLAYFFANKMIMKVAAKAESLHIIDFGILYGFQWPMLIKFLSNREYGPPKLRITGIEFPLPGFRPMERIQETGRRLAKYCKRFNVPFEFNAIASWNWETIRVEDLKIKSNEVVVVNSLMRFKNLLDESIEANSPRSAVLHLIRKINPDIFTQSIVNGSYNSPFFSTWFREALFHFSAIYDMFDTVIQRENEWRMMIQKESVGREAMNVVACEGLERVERPETYKQWQVRNTRAGFKQLPLNSELMANFRTELRQWYHKDFVFDEDSNWMLQGWKGRILYASTCWV
Links
Other
GRAS
family TFs
Other
Cicer arietinum
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_16677
Cicer arietinum
Ca_16677
N
0.864
MTR_4g064150
Medicago truncatula
MTR_4g064150
N
0.829
MTR_4g064120
Medicago truncatula
MTR_4g064120
N
0.817
MTR_4g064180
Medicago truncatula
MTR_4g064180
N
0.790
GLYMA11G14720
Glycine max
GLYMA11G14720
N
0.775
GLYMA11G14710
Glycine max
GLYMA11G14710
N
0.759
GLYMA11G14700
Glycine max
GLYMA11G14700
N
0.741
GLYMA12G06640
Glycine max
GLYMA12G06640
N
0.733
GLYMA13G41240
Glycine max
GLYMA13G41240
N
0.730
GLYMA15G04173
Glycine max
GLYMA15G04173
N
0.719
MTR_2g097410
Medicago truncatula
MTR_2g097410
N
0.715
Ca_02625
Cicer arietinum
Ca_02625
N
0.714
GLYMA12G06655
Glycine max
GLYMA12G06655
N
0.710