29589.m001269 (Ricinus communis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 29589.m001269 T137772_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29589.m001269 C2H2 ZF 341 363
29589.m001269 C2H2 ZF 373 389

Links

Other C2H2 ZF family TFs
Other Ricinus communis TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00140p00061590 Amborella trichopoda AMTR_s00140p00061590 N 0.787
Aquca_009_01096 Aquilegia coerulea Aquca_009_01096 N 0.757
BGIOSGA015622 Oryza indica BGIOSGA015622 N 0.806
cassava27114.m1 Manihot esculenta cassava27114.m1 N 0.811
cassava28521.m1 Manihot esculenta cassava28521.m1 N 0.811
Ca_07000 Cicer arietinum Ca_07000 N 0.801
chr3.CM0070.360.nc Lotus japonicus chr3.CM0070.360.nc N 0.802
Ciclev10029807m.g Citrus clementina Ciclev10029807m.g N 0.811
Ciclev10029984m.g Citrus clementina Ciclev10029984m.g N 0.811
Cla001892 Citrullus lanatus Cla001892 N 0.805
Cucsa.200410 Cucumis sativus Cucsa.200410 N 0.805
Eucgr.B03926 Eucalyptus grandis Eucgr.B03926 N 0.801
Eucgr.J00391 Eucalyptus grandis Eucgr.J00391 N 0.811
gene01102-v1.0-hybrid Fragaria vesca gene01102-v1.0-hybrid N 0.811
GLYMA11G19810 Glycine max GLYMA11G19810 N 0.777
GLYMA12G08680 Glycine max GLYMA12G08680 N 0.777
GLYMA12G30285 Glycine max GLYMA12G30285 N 0.811
GLYMA13G39610 Glycine max GLYMA13G39610 N 0.811
Gorai.006G104700 Gossypium raimondii Gorai.006G104700 N 0.809
Gorai.009G090000 Gossypium raimondii Gorai.009G090000 N 0.811
GSMUA_Achr11G02230_001 Musa acuminata GSMUA_Achr11G02230_001 N 0.806
GSMUA_Achr1G15330_001 Musa acuminata GSMUA_Achr1G15330_001 N 0.795
LPERR08G20460 Leersia perrieri LPERR08G20460 N 0.763
MDP0000224892 Malus domestica MDP0000224892 N 0.811
MDP0000610922 Malus domestica MDP0000610922 N 0.811
mgf025993m Mimulus guttatus mgf025993m N 0.811
OB08G30610 Oryza brachyantha OB08G30610 N 0.763
OBART04G02230 Oryza barthii OBART04G02230 N 0.806
OGLUM04G01880 Oryza glumaepatula OGLUM04G01880 N 0.806
OGLUM08G25260 Oryza glumaepatula OGLUM08G25260 N 0.777
OMERI04G02190 Oryza meridionalis OMERI04G02190 N 0.806
ONIVA08G18580 Oryza nivara ONIVA08G18580 N 0.806
OPUNC04G02200 Oryza punctata OPUNC04G02200 N 0.806
OPUNC08G21710 Oryza punctata OPUNC08G21710 N 0.763
orange1.1g042026m.g Citrus sinensis orange1.1g042026m.g N 0.811
orange1.1g044007m.g Citrus sinensis orange1.1g044007m.g N 0.811
ORGLA04G0016600 Oryza glaberrima ORGLA04G0016600 N 0.806
ORUFI04G02970 Oryza rufipogon ORUFI04G02970 N 0.806
ORUFI08G26260 Oryza rufipogon ORUFI08G26260 N 0.777
OS04G0165200 Oryza sativa OS04G0165200 N 0.806
PGSC0003DMG400000419 Solanum tuberosum PGSC0003DMG400000419 N 0.801
Pm001162 Prunus mume Pm001162 N 0.811
POPTR_0004s22670 Populus trichocarpa POPTR_0004s22670 N 0.811
PRUPE_ppa019036mg Prunus persica PRUPE_ppa019036mg N 0.811
SapurV1A.0360s0140 Salix purpurea SapurV1A.0360s0140 N 0.811
Sb07g023890 Sorghum bicolor Sb07g023890 N 0.763
Si013894m.g Setaria italica Si013894m.g N 0.763
Solyc11g066420.1 Solanum lycopersicum Solyc11g066420.1 N 0.801
TCM_041585 Theobroma cacao TCM_041585 N 0.811
VIT_06s0061g00780 Vitis vinifera VIT_06s0061g00780 N 0.787