Cla001892 (Citrullus lanatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cla001892 T133924_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla001892 C2H2 ZF 292 314
Cla001892 C2H2 ZF 315 340

Links

Other C2H2 ZF family TFs
Other Citrullus lanatus TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.200410 Cucumis sativus Cucsa.200410 N 0.827
GLYMA12G30285 Glycine max GLYMA12G30285 N 0.821
POPTR_0004s22670 Populus trichocarpa POPTR_0004s22670 N 0.821
PRUPE_ppa019036mg Prunus persica PRUPE_ppa019036mg N 0.821
TCM_041585 Theobroma cacao TCM_041585 N 0.821
Pm001162 Prunus mume Pm001162 N 0.821
cassava27114.m1 Manihot esculenta cassava27114.m1 N 0.821
cassava28521.m1 Manihot esculenta cassava28521.m1 N 0.821
mgf025993m Mimulus guttatus mgf025993m N 0.821
Ciclev10029807m.g Citrus clementina Ciclev10029807m.g N 0.821
Ciclev10029984m.g Citrus clementina Ciclev10029984m.g N 0.821
Eucgr.J00391 Eucalyptus grandis Eucgr.J00391 N 0.821
gene01102-v1.0-hybrid Fragaria vesca gene01102-v1.0-hybrid N 0.821
Gorai.009G090000 Gossypium raimondii Gorai.009G090000 N 0.821
MDP0000224892 Malus domestica MDP0000224892 N 0.821
MDP0000610922 Malus domestica MDP0000610922 N 0.821
orange1.1g042026m.g Citrus sinensis orange1.1g042026m.g N 0.821
orange1.1g044007m.g Citrus sinensis orange1.1g044007m.g N 0.821
SapurV1A.0360s0140 Salix purpurea SapurV1A.0360s0140 N 0.821
Gorai.006G104700 Gossypium raimondii Gorai.006G104700 N 0.818
BGIOSGA015622 Oryza indica BGIOSGA015622 N 0.816
GSMUA_Achr11G02230_001 Musa acuminata GSMUA_Achr11G02230_001 N 0.816
OBART04G02230 Oryza barthii OBART04G02230 N 0.816
OGLUM04G01880 Oryza glumaepatula OGLUM04G01880 N 0.816
OMERI04G02190 Oryza meridionalis OMERI04G02190 N 0.816
ONIVA08G18580 Oryza nivara ONIVA08G18580 N 0.816
OPUNC04G02200 Oryza punctata OPUNC04G02200 N 0.816
ORGLA04G0016600 Oryza glaberrima ORGLA04G0016600 N 0.816
ORUFI04G02970 Oryza rufipogon ORUFI04G02970 N 0.816
OS04G0165200 Oryza sativa OS04G0165200 N 0.816
GLYMA13G39610 Glycine max GLYMA13G39610 N 0.815
PGSC0003DMG400000419 Solanum tuberosum PGSC0003DMG400000419 N 0.811
Solyc11g066420.1 Solanum lycopersicum Solyc11g066420.1 N 0.811
Ca_07000 Cicer arietinum Ca_07000 N 0.811
Eucgr.B03926 Eucalyptus grandis Eucgr.B03926 N 0.811
chr3.CM0070.360.nc Lotus japonicus chr3.CM0070.360.nc N 0.811
GSMUA_Achr1G15330_001 Musa acuminata GSMUA_Achr1G15330_001 N 0.805
29589.m001269 Ricinus communis 29589.m001269 N 0.805
VIT_06s0061g00780 Vitis vinifera VIT_06s0061g00780 N 0.797
AMTR_s00140p00061590 Amborella trichopoda AMTR_s00140p00061590 N 0.796
GLYMA12G08680 Glycine max GLYMA12G08680 N 0.786
OGLUM08G25260 Oryza glumaepatula OGLUM08G25260 N 0.786
ORUFI08G26260 Oryza rufipogon ORUFI08G26260 N 0.786
GLYMA11G19810 Glycine max GLYMA11G19810 N 0.772
LPERR08G20460 Leersia perrieri LPERR08G20460 N 0.772
OB08G30610 Oryza brachyantha OB08G30610 N 0.772
OPUNC08G21710 Oryza punctata OPUNC08G21710 N 0.772
Sb07g023890 Sorghum bicolor Sb07g023890 N 0.772
Si013894m.g Setaria italica Si013894m.g N 0.772
Aquca_009_01096 Aquilegia coerulea Aquca_009_01096 N 0.767
BGIOSGA026480 Oryza indica BGIOSGA026480 N 0.762
BRADI3G12490 Brachypodium distachyon BRADI3G12490 N 0.762
OLONG_023180 Oryza longistaminata OLONG_023180 N 0.762
OMERI08G18590 Oryza meridionalis OMERI08G18590 N 0.762
ORGLA08G0191700 Oryza glaberrima ORGLA08G0191700 N 0.762
OS08G0562300 Oryza sativa OS08G0562300 N 0.762
TRIUR3_12142 Triticum urartu TRIUR3_12142 N 0.762
Pavir.Fa00049 Panicum virgatum Pavir.Fa00049 N 0.762
Pavir.Fb02219 Panicum virgatum Pavir.Fb02219 N 0.762