CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_80281
(
Neurospora discreta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_80281
T138753_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06907
M01889_2.00
Neurospora crassa
YYMGCCHCNN
NNGDGGCKRR
PBM
Weirauch et al.(2014)
pTH9682
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_80281
C2H2 ZF
535
559
WVCTYEDCRKRFGRKENIKSHVQTH
estExt_fgenesh2_pg.C_80281
C2H2 ZF
565
587
YQCPTCKKCFVRQHDLKRHAKIH
estExt_fgenesh2_pg.C_80281
C2H2 ZF
594
613
PCECGNSFARHDALTRHRQR
Links
Other
C2H2 ZF
family TFs
Other
Neurospora discreta
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O7_09309
Cladophialophora yegresii
A1O7_09309
I
0.000
fgenesh1_pm.sca_1_chr1_3_0000032
Nectria haematococca
fgenesh1_pm.sca_1_chr1_3_0000032
N
0.000
MAC_07154
Metarhizium acridum
MAC_07154
N
0.000
NCU09804
Neurospora crassa
NCU09804
N
0.000
NechaG89899
Fusarium solani
NechaG89899
N
0.000
SBOR_7563
Sclerotinia borealis
SBOR_7563
N
0.000
VDBG_04863
Verticillium albo atrum
VDBG_04863
N
0.000
VDBG_04863
Verticillium alfalfae
VDBG_04863
N
0.000
VHEMI08921
Torrubiella hemipterigena
VHEMI08921
N
0.000
X797_005779
Metarhizium robertsii
X797_005779
N
0.000