Pavir.J15304 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.J15304 T143418_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J15304.1.p C2H2 ZF 93 115
Pavir.J15304.1.p C2H2 ZF 155 177

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R013387 Calypte anna Aan_R013387 I 0.000
Afo_R010236 Aptenodytes forsteri Afo_R010236 I 0.000
Alligator_sinensis_CCG010229.1 Alligator sinensis Alligator_sinensis_CCG010229.1 I 0.000
BCL6 Ornithorhynchus anatinus ENSOANG00000000872 I 0.000
BCL6 Meleagris gallopavo ENSMGAG00000007602 I 0.000
BCL6 Microcebus murinus ENSMICG00000001780 I 0.000
BCL6 Myotis lucifugus ENSMLUG00000012905 I 0.000
BCL6 Macaca mulatta ENSMMUG00000009198 I 0.000
Bcl6 Mus musculus ENSMUSG00000022508 D 0.000
BCL6 Tursiops truncatus ENSTTRG00000017230 I 0.000
BCL6 Loxodonta africana ENSLAFG00000012300 I 0.000
BCL6 Oryctolagus cuniculus ENSOCUG00000005429 I 0.000
BCL6 Otolemur garnettii ENSOGAG00000007638 I 0.000
BCL6 Ochotona princeps ENSOPRG00000005797 I 0.000
BCL6 Taeniopygia guttata ENSTGUG00000009413 I 0.000
BCL6 Sus scrofa ENSSSCG00000011810 I 0.000
Bcl6 Rattus norvegicus ENSRNOG00000001843 I 0.000
BCL6 Pan troglodytes ENSPTRG00000015728 I 0.000
BCL6 Gorilla gorilla ENSGGOG00000026549 I 0.000
BCL6 Gallus gallus ENSGALG00000007357 I 0.000
BCL6 Homo sapiens ENSG00000113916 D 0.000
BCL6 Felis catus ENSFCAG00000006810 I 0.000
BCL6 Echinops telfairi ENSETEG00000014830 I 0.000
BCL6 Erinaceus europaeus ENSEEUG00000000344 I 0.000
BCL6 Equus caballus ENSECAG00000004556 I 0.000
Bcl6 Dipodomys ordii ENSDORG00000005608 I 0.000
BCL6 Dasypus novemcinctus ENSDNOG00000004306 I 0.000
BCL6 Cavia porcellus ENSCPOG00000004090 I 0.000
BCL6 Callithrix jacchus ENSCJAG00000014375 I 0.000
BCL6 Canis familiaris ENSCAFG00000013904 I 0.000
BCL6 Bos taurus ENSBTAG00000001511 I 0.000
bcl6 Xenopus tropicalis XB-GENE-984479 I 0.000
BCL6 Anolis carolinensis ENSACAG00000006666 I 0.000
bcl6.L Xenopus laevis XB-GENE-984483 I 0.000
bcl6.S Xenopus laevis XB-GENE-17336238 I 0.000
Brh_R006050 Buceros rhinoceros Brh_R006050 I 0.000
Cmyd_10010560 Chelonia mydas Cmyd_10010560 I 0.000
ENSAMEG00000000812 Ailuropoda melanoleuca ENSAMEG00000000812 I 0.000
ENSAPLG00000015868 Anas platyrhynchos ENSAPLG00000015868 I 0.000
ENSBTAP00000001978-D1 Bos grunniens ENSBTAP00000001978-D1 I 0.000
ENSCSAG00000009138 Chlorocebus sabaeus ENSCSAG00000009138 I 0.000
ENSMEUG00000004411 Macropus eugenii ENSMEUG00000004411 I 0.000
ENSMPUG00000003415 Mustela putorius furo ENSMPUG00000003415 I 0.000
ENSNLEG00000006705 Nomascus leucogenys ENSNLEG00000006705 I 0.000
ENSP00000384371 Macaca fascicularis ENSP00000384371 I 0.000
ENSPANG00000017677 Papio anubis ENSPANG00000017677 I 0.000
ENSPPYG00000014395 Pongo abelii ENSPPYG00000014395 I 0.000
ENSPSIG00000014529 Pelodiscus sinensis ENSPSIG00000014529 I 0.000
ENSSHAG00000013935 Sarcophilus harrisii ENSSHAG00000013935 I 0.000
Gfo_R004424 Geospiza fortis Gfo_R004424 I 0.000
Myotis_brandtii_BCL6_10016106 Myotis brandtii Myotis_brandtii_BCL6_10016106 I 0.000
Pvit_01837 Pogona vitticeps Pvit_01837 I 0.000
Tal_R005794 Tyto alba Tal_R005794 I 0.000