CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.1936.1.1
(
Phytophthora capsici
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw1.1936.1.1
T146125_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.1936.1.1
C2H2 ZF
40
64
HCCTEPGCNRHFNRRYTLIEHMKTH
e_gw1.1936.1.1
C2H2 ZF
70
94
HVCPVRTCAKRFSTSGNLSRHKRLH
e_gw1.1936.1.1
C2H2 ZF
100
124
LQCPVDGCLSSFPSNNKLEKHMKFH
e_gw1.1936.1.1
C2H2 ZF
130
155
HVCKVNHCGKTFSTVGNLNRHRKHQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora capsici
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_10168
Phytophthora parasitica
F443_10168
N
0.808
fgenesh_scip_prom.28083.660
Phytophthora lateralis
fgenesh_scip_prom.28083.660
N
0.783
fgenesh_scip_prom.46568.9633
Phytophthora kernoviae
fgenesh_scip_prom.46568.9633
N
0.771
maker-pir_contig_723-snap-gene-0.9
Pythium irregulare
maker-pir_contig_723-snap-gene-0.9
N
0.767
Phyra76423
Phytophthora ramorum
Phyra76423
N
0.768
PYU1_G008756
Pythium ultimum
PYU1_G008756
N
0.760