CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pir_contig_723-snap-gene-0.9
(
Pythium irregulare
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
maker-pir_contig_723-snap-gene-0.9
T122578_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000021411
C2H2 ZF
76
100
FHCPEHDCFRKFNRRYTLIEHLKIH
EPrPI00000021411
C2H2 ZF
106
130
HVCPAAGCRKRFTTSGNLSRHKRLH
EPrPI00000021411
C2H2 ZF
136
160
LECPVDGCMSTFPSNNKLEKHMKYH
EPrPI00000021411
C2H2 ZF
166
197
HVCKIGTCGKTFSTMGNLNRHVKHHHNLEVHE
Links
Other
C2H2 ZF
family TFs
Other
Pythium irregulare
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYU1_G008756
Pythium ultimum
PYU1_G008756
N
0.805
F443_10168
Phytophthora parasitica
F443_10168
N
0.777
fgenesh_scip_prom.46568.9633
Phytophthora kernoviae
fgenesh_scip_prom.46568.9633
N
0.774
e_gw1.1936.1.1
Phytophthora capsici
e_gw1.1936.1.1
N
0.767
fgenesh_scip_prom.28083.660
Phytophthora lateralis
fgenesh_scip_prom.28083.660
N
0.762
Phyra76423
Phytophthora ramorum
Phyra76423
N
0.762
maker-pir_contig_723-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_723-fgenesh-gene-0.2
N
0.757