CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Minc12474
(
Meloidogyne incognita
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Minc12474
T146450_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc12474a
C2H2 ZF
161
183
YVCERCGIRCKKPSMLKKHLRSH
Minc12474a
C2H2 ZF
189
213
FTCMTCNFSFKTKGNLTKHLVSKTH
Minc12474a
C2H2 ZF
621
643
FHCDMCDRKFRKESELLLHKQTH
Minc12474a
C2H2 ZF
663
686
FQCSECPTVVRSKTMLNRHTESVH
Minc12474a
C2H2 ZF
992
1015
TRCQLCDLNFDSPAQLSVHFHADH
Minc12474a
C2H2 ZF
1024
1048
FRCSRRNCEKVFPSRESLRAHIYAH
Minc12474b
C2H2 ZF
113
136
TRCQLCDLNFDSPAQLSVHFHADH
Minc12474b
C2H2 ZF
145
169
FRCSRRNCEKVFPSRESLRAHIYAH
Minc12474c
C2H2 ZF
143
166
HVCVECDAGFTTESALQAHRERQH
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne incognita
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG2052
Drosophila melanogaster
FBgn0262636
D
GA22510
Drosophila pseudoobscura
FBgn0243913
I
GB41731
Apis mellifera
GB41731
I
GE14516
Drosophila yakuba
FBgn0232119
I
GG16450
Drosophila erecta
FBgn0108681
I
GH23618
Drosophila grimshawi
FBgn0131075
I
GJ18239
Drosophila virilis
FBgn0205401
I
GK13709
Drosophila willistoni
FBgn0215717
I
GL18148
Drosophila persimilis
FBgn0155751
I
GM26782
Drosophila sechellia
FBgn0181635
I
LLOJ002432
Lutzomyia longipalpis
LLOJ002432
I