CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASIS005657
(
Anopheles sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ASIS005657
T150283_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.827
0.991
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.827
0.991
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.827
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASIS005657-PA
C2H2 ZF
809
831
YECNVCSKTFGQLSNLKVHLRTH
ASIS005657-PA
C2H2 ZF
837
859
FKCNVCTKSFTQLAHLQKHHLVH
ASIS005657-PA
C2H2 ZF
865
887
HQCDICKKRFSSTSNLKTHLRLH
ASIS005657-PA
C2H2 ZF
893
915
YACDLCPQKFTQFVHLKLHKRLH
ASIS005657-PA
C2H2 ZF
921
942
YVCQGCDKKYISASGLRTHWKT
Links
Other
C2H2 ZF
family TFs
Other
Anopheles sinensis
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL54
Arabidopsis thaliana
AT5G27090
N
AT5G26865
Arabidopsis thaliana
AT5G26865
N
fgenesh2_kg.6__2748__AT5G27944.1
Arabidopsis lyrata
fgenesh2_kg.6__2748__AT5G27944.1
N
fgenesh2_kg.6__2751__AT5G27070.1
Arabidopsis lyrata
fgenesh2_kg.6__2751__AT5G27070.1
N
scaffold_602835.1
Arabidopsis lyrata
scaffold_602835.1
N
Thhalv10005435m.g
Eutrema salsugineum
Thhalv10005435m.g
N
Thhalv10005452m.g
Eutrema salsugineum
Thhalv10005452m.g
N