HCOI00760100 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI00760100 T153817_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
blmp-1
M08103_2.00 		Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR		 ChIP-seq
Mathelier et al.(2014)
MA0537.1 		0.797 0.904
blmp-1
M08195_2.00 		Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB		 ChIP-seq
Contrino et al.(2012)
Mw137 		0.797 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00760100.t1 C2H2 ZF 487 509
HCOI00760100.t1 C2H2 ZF 515 537
HCOI00760100.t1 C2H2 ZF 543 565
HCOI00760100.t1 C2H2 ZF 571 593
HCOI00760100.t1 C2H2 ZF 599 620
HCOI00760100.t2 C2H2 ZF 486 508
HCOI00760100.t2 C2H2 ZF 514 536
HCOI00760100.t2 C2H2 ZF 542 564
HCOI00760100.t2 C2H2 ZF 570 592
HCOI00760100.t2 C2H2 ZF 598 619

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_13506 Ancylostoma caninum ANCCAN_13506 I 0.827
ANCCEY_05862 Ancylostoma ceylanicum ANCCEY_05862 I 0.827
ANCDUO_02710 Ancylostoma duodenale ANCDUO_02710 I 0.827
blmp-1 Caenorhabditis elegans WBGene00003847 D 0.797
CBG02201 Caenorhabditis briggsae CBG02201 I 0.797
CBN18993 Caenorhabditis brenneri CBN18993 I 0.797
CRE29848 Caenorhabditis remanei CRE29848 I 0.797
D917_07972 Trichinella nativa D917_07972 I 0.766
D918_01175 Trichuris suis D918_01175 I 0.764
EFV52614 Trichinella spiralis EFV52614 I 0.762
Hba_09212 Heterorhabditis bacteriophora Hba_09212 I 0.823
HPLM_0001789201 Haemonchus placei HPLM_0001789201 I 0.827
L596_g21750 Steinernema carpocapsae L596_g21750 I 0.765
L889_g7623 Steinernema feltiae L889_g7623 I 0.765
L892_g2443 Steinernema scapterisci L892_g2443 I 0.765
L893_g23908 Steinernema glaseri L893_g23908 I 0.765
L898_g18820 Steinernema monticolum L898_g18820 I 0.765
MhA1_Contig1748.frz3.gene3 Meloidogyne hapla MhA1_Contig1748.frz3.gene3 N 0.764
Minc14190 Meloidogyne incognita Minc14190 N 0.757
NBR_0002088601 Nippostrongylus brasiliensis NBR_0002088601 I 0.825
SMAR011793 Strigamia maritima SMAR011793 I 0.756
TELCIR_19105 Teladorsagia circumcincta TELCIR_19105 I 0.827
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I 0.764
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I 0.764