NBR_0000990501 (Nippostrongylus brasiliensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 NBR_0000990501 T155089_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.794 0.913
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.767 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0000990501-mRNA-1 C2H2 ZF 126 148
NBR_0000990501-mRNA-1 C2H2 ZF 154 176
NBR_0000990501-mRNA-1 C2H2 ZF 182 204

Links

Other C2H2 ZF family TFs
Other Nippostrongylus brasiliensis TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001234 Calypte anna Aan_R001234 I 0.000
Afo_R013084 Aptenodytes forsteri Afo_R013084 I 0.000
Brh_R009865 Buceros rhinoceros Brh_R009865 I 0.000
Cmyd_10014359 Chelonia mydas Cmyd_10014359 I 0.000
ENSAMEG00000005407 Ailuropoda melanoleuca ENSAMEG00000005407 I 0.000
ENSAMXG00000006682 Astyanax mexicanus ENSAMXG00000006682 N 0.000
ENSAPLG00000002762 Anas platyrhynchos ENSAPLG00000002762 I 0.000
ENSCSAG00000006941 Chlorocebus sabaeus ENSCSAG00000006941 I 0.000
ENSFALG00000006027 Ficedula albicollis ENSFALG00000006027 I 0.000
ENSGMOG00000002842 Gadus morhua ENSGMOG00000002842 N 0.000
ENSLACG00000005866 Latimeria chalumnae ENSLACG00000005866 N 0.000
ENSLOCG00000002726 Lepisosteus oculatus ENSLOCG00000002726 N 0.000
ENSMEUG00000016730 Macropus eugenii ENSMEUG00000016730 N 0.000
ENSMMUP00000039977 Macaca fascicularis ENSMMUP00000039977 I 0.000
ENSMPUG00000000272 Mustela putorius furo ENSMPUG00000000272 I 0.000
ENSONIG00000005193 Oreochromis niloticus ENSONIG00000005193 N 0.000
ENSORLG00000006797 Oryzias latipes ENSORLG00000006797 I 0.000
ENSP00000419153-D1 Bos grunniens ENSP00000419153-D1 I 0.000
ENSPANG00000015935 Papio anubis ENSPANG00000015935 I 0.000
ENSPFOG00000019375 Poecilia formosa ENSPFOG00000019375 N 0.000
ENSPPYG00000013526 Pongo abelii ENSPPYG00000013526 I 0.000
ENSSHAG00000009719 Sarcophilus harrisii ENSSHAG00000009719 I 0.000
ENSSSCG00000021456 Sus scrofa ENSSSCG00000021456 I 0.000
ENSSTOG00000001832 Ictidomys tridecemlineatus ENSSTOG00000001832 I 0.000
ENSTSYG00000009685 Tarsius syrichta ENSTSYG00000009685 I 0.000
ENSXMAG00000012908 Xiphophorus maculatus ENSXMAG00000012908 N 0.000
Gfo_R000202 Geospiza fortis Gfo_R000202 I 0.000
Myotis_brandtii_ZBTB20_10031765 Myotis brandtii Myotis_brandtii_ZBTB20_10031765 I 0.000
Ogr18740 Ophisaurus gracilis Ogr18740 I 0.000
Pvit_00937 Pogona vitticeps Pvit_00937 I 0.000
XP_002939695 Xenopus tropicalis XP_002939695 I 0.000
ZBTB20 Dasypus novemcinctus ENSDNOG00000042525 I 0.000
ZBTB20 Taeniopygia guttata ENSTGUG00000013404 I 0.000
zbtb20 Tetraodon nigroviridis ENSTNIG00000010038 I 0.000
zbtb20 Takifugu rubripes ENSTRUG00000016839 I 0.000
ZBTB20 Felis catus ENSFCAG00000022767 I 0.000
ZBTB20 Echinops telfairi ENSETEG00000013007 I 0.000
ZBTB20 Erinaceus europaeus ENSEEUG00000005612 I 0.000
ZBTB20 Equus caballus ENSECAG00000015809 I 0.000
Zbtb20 Dipodomys ordii ENSDORG00000008535 I 0.000
ZBTB20 Tupaia belangeri ENSTBEG00000016630 I 0.000
zbtb20 Danio rerio ENSDARG00000005586 N 0.000
ZBTB20 Cavia porcellus ENSCPOG00000021801 I 0.000
ZBTB20 Callithrix jacchus ENSCJAG00000009211 I 0.000
ZBTB20 Choloepus hoffmanni ENSCHOG00000008995 N 0.000
ZBTB20 Canis familiaris ENSCAFG00000010823 I 0.000
ZBTB20 Bos taurus ENSBTAG00000011928 I 0.000
ZBTB20 Anolis carolinensis ENSACAG00000009851 I 0.000
ZBTB20 Monodelphis domestica ENSMODG00000018181 I 0.000
ZBTB20 Homo sapiens ENSG00000181722 D 0.000
ZBTB20 Sus scrofa ENSSSCG00000026113 I 0.000
zbtb20 Gasterosteus aculeatus ENSGACG00000020693 I 0.000
ZBTB20 Gallus gallus ENSGALG00000015094 I 0.000
ZBTB20 Sorex araneus ENSSARG00000013404 I 0.000
Zbtb20 Rattus norvegicus ENSRNOG00000056716 I 0.000
ZBTB20 Pan troglodytes ENSPTRG00000015244 I 0.000
ZBTB20 Gorilla gorilla ENSGGOG00000025065 I 0.000
ZBTB20 Loxodonta africana ENSLAFG00000002752 I 0.000
ZBTB20 Meleagris gallopavo ENSMGAG00000014320 I 0.000
ZBTB20 Microcebus murinus ENSMICG00000008815 I 0.000
ZBTB20 Myotis lucifugus ENSMLUG00000014239 I 0.000
ZBTB20 Otolemur garnettii ENSOGAG00000029972 I 0.000
ZBTB20 Oryctolagus cuniculus ENSOCUG00000004232 I 0.000
Zbtb20 Mus musculus ENSMUSG00000022708 I 0.000