TRE_0001193801 (Trichobilharzia regenti)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TRE_0001193801 T158008_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0001193801-mRNA-1 C2H2 ZF 112 135
TRE_0001193801-mRNA-1 C2H2 ZF 140 163
TRE_0001193801-mRNA-1 C2H2 ZF 206 228
TRE_0001193801-mRNA-1 C2H2 ZF 235 259
TRE_0001193801-mRNA-1 C2H2 ZF 273 294
TRE_0001193801-mRNA-1 C2H2 ZF 333 357
TRE_0001193801-mRNA-1 C2H2 ZF 365 388

Links

Other C2H2 ZF family TFs
Other Trichobilharzia regenti TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC214648.3_FG005 Zea mays AC214648.3_FG005 I
BGIOSGA018905 Oryza indica BGIOSGA018905 I
BRADI2G37960 Brachypodium distachyon BRADI2G37960 N
Carubv10010390m.g Capsella rubella Carubv10010390m.g N
cassava11218.m1 Manihot esculenta cassava11218.m1 I
cassava40961.m1 Manihot esculenta cassava40961.m1 I
cassava44959.m1 Manihot esculenta cassava44959.m1 N
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I
Ca_02507 Cicer arietinum Ca_02507 N
Ca_04287 Cicer arietinum Ca_04287 I
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N
Cla000556 Citrullus lanatus Cla000556 I
Cucsa.052720 Cucumis sativus Cucsa.052720 I
Cucsa.166030 Cucumis sativus Cucsa.166030 N
Cucsa.239660 Cucumis sativus Cucsa.239660 I
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N
GLYMA11G15810 Glycine max GLYMA11G15810 N
GLYMA12G07650 Glycine max GLYMA12G07650 I
GLYMA15G05030 Glycine max GLYMA15G05030 I
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N
LjSGA_079580.1.1 Lotus japonicus LjSGA_079580.1.1 I
Lus10011645.g Linum usitatissimum Lus10011645.g I
Lus10036130.g Linum usitatissimum Lus10036130.g I
Lus10040373.g Linum usitatissimum Lus10040373.g I
MDP0000123013 Malus domestica MDP0000123013 I
MDP0000151784 Malus domestica MDP0000151784 I
MDP0000822986 Malus domestica MDP0000822986 I
MDP0000879799 Malus domestica MDP0000879799 N
mgf015666m Mimulus guttatus mgf015666m N
MTR_1g095850 Medicago truncatula MTR_1g095850 I
MTR_4g060950 Medicago truncatula MTR_4g060950 I
OB03G23270 Oryza brachyantha OB03G23270 N
OB05G11740 Oryza brachyantha OB05G11740 I
ONIVA05G01850 Oryza nivara ONIVA05G01850 I
OPUNC05G01600 Oryza punctata OPUNC05G01600 N
ORUFI05G01750 Oryza rufipogon ORUFI05G01750 I
OS05G0123000 Oryza sativa OS05G0123000 I
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N
PDK_20s1376911g004 Phoenix dactylifera PDK_20s1376911g004 I
PDK_20s1595351g001 Phoenix dactylifera PDK_20s1595351g001 N
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I
Pm018585 Prunus mume Pm018585 I
POPTR_0005s10050 Populus trichocarpa POPTR_0005s10050 I
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I
Sb09g002190 Sorghum bicolor Sb09g002190 I
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I
TCM_043081 Theobroma cacao TCM_043081 I
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N