Bra009200 (Brassica rapa)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 Bra009200 T159810_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra009200.1-P CBF/NF-Y 127 183

Links

Other CBF/NF-Y family TFs
Other Brassica rapa TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29333.m001059 Ricinus communis 29333.m001059 N 0.732
Bo1g150420 Brassica oleracea Bo1g150420 N 0.786
Bo3g060160 Brassica oleracea Bo3g060160 N 0.821
Bo5g145140 Brassica oleracea Bo5g145140 N 0.821
Bo9g176100 Brassica oleracea Bo9g176100 N 0.946
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N 0.849
Bostr.2570s0105 Boechera stricta Bostr.2570s0105 N 0.786
Bra001164 Brassica rapa Bra001164 N 0.804
Bra040529 Brassica rapa Bra040529 N 0.786
Cagra.2108s0005 Capsella grandiflora Cagra.2108s0005 N 0.804
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N 0.830
Carubv10001713m.g Capsella rubella Carubv10001713m.g N 0.830
Carubv10014086m.g Capsella rubella Carubv10014086m.g N 0.804
Ca_00866 Cicer arietinum Ca_00866 N 0.786
Ca_14455 Cicer arietinum Ca_14455 N 0.786
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N 0.750
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N 0.786
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N 0.804
Cla017884 Citrullus lanatus Cla017884 N 0.768
Cucsa.241980 Cucumis sativus Cucsa.241980 N 0.768
Eucgr.A02570 Eucalyptus grandis Eucgr.A02570 N 0.732
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N 0.786
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N 0.732
GLYMA02G35190 Glycine max GLYMA02G35190 N 0.768
GLYMA03G36140 Glycine max GLYMA03G36140 N 0.768
GLYMA10G10240 Glycine max GLYMA10G10240 N 0.750
GLYMA19G38800 Glycine max GLYMA19G38800 N 0.804
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N 0.750
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N 0.750
Lus10013592.g Linum usitatissimum Lus10013592.g N 0.750
Lus10021259.g Linum usitatissimum Lus10021259.g N 0.750
MDP0000129029 Malus domestica MDP0000129029 N 0.714
MDP0000183865 Malus domestica MDP0000183865 I 0.773
MDP0000375005 Malus domestica MDP0000375005 N 0.732
MDP0000588222 Malus domestica MDP0000588222 N 0.714
MDP0000785523 Malus domestica MDP0000785523 N 0.714
MDP0000948645 Malus domestica MDP0000948645 N 0.732
MTR_1g056530 Medicago truncatula MTR_1g056530 N 0.768
MTR_7g106450 Medicago truncatula MTR_7g106450 N 0.768
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N 0.868
NFYA10 Arabidopsis thaliana AT5G06510 N 0.868
orange1.1g021081m.g Citrus sinensis orange1.1g021081m.g N 0.804
PK26326.1 Cannabis sativa PK26326.1 N 0.732
Pm026038 Prunus mume Pm026038 N 0.750
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N 0.750
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N 0.750
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N 0.750
SapurV1A.0258s0010 Salix purpurea SapurV1A.0258s0010 N 0.714
SapurV1A.0980s0030 Salix purpurea SapurV1A.0980s0030 N 0.714
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N 0.714
TCM_022984 Theobroma cacao TCM_022984 N 0.768
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N 0.857
Thhalv10021244m.g Eutrema salsugineum Thhalv10021244m.g N 0.821
UNE8 Arabidopsis lyrata fgenesh2_kg.3__563__AT3G05690.1 N 0.786
UNE8 Arabidopsis thaliana AT3G05690 N 0.786
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N 0.786