Bra040529 (Brassica rapa)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 Bra040529 T159821_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra040529.1-P CBF/NF-Y 121 187

Links

Other CBF/NF-Y family TFs
Other Brassica rapa TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g150420 Brassica oleracea Bo1g150420 N 1.000
Thhalv10021244m.g Eutrema salsugineum Thhalv10021244m.g N 0.946
Bo5g145140 Brassica oleracea Bo5g145140 N 0.929
Bostr.2570s0105 Boechera stricta Bostr.2570s0105 N 0.929
UNE8 Arabidopsis thaliana AT3G05690 N 0.911
Bo3g060160 Brassica oleracea Bo3g060160 N 0.911
UNE8 Arabidopsis lyrata fgenesh2_kg.3__563__AT3G05690.1 N 0.911
Cagra.2108s0005 Capsella grandiflora Cagra.2108s0005 N 0.911
Carubv10014086m.g Capsella rubella Carubv10014086m.g N 0.911
Bra001164 Brassica rapa Bra001164 N 0.893
NFYA10 Arabidopsis thaliana AT5G06510 N 0.857
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N 0.857
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N 0.839
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N 0.839
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N 0.821
Carubv10001713m.g Capsella rubella Carubv10001713m.g N 0.821
Bo9g176100 Brassica oleracea Bo9g176100 N 0.804
Bra009200 Brassica rapa Bra009200 N 0.786
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N 0.786
Cla017884 Citrullus lanatus Cla017884 N 0.786
Cucsa.241980 Cucumis sativus Cucsa.241980 N 0.786
Lus10013592.g Linum usitatissimum Lus10013592.g N 0.786
Lus10021259.g Linum usitatissimum Lus10021259.g N 0.786
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N 0.768
VIT_11s0016g01480 Vitis vinifera VIT_11s0016g01480 N 0.768
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N 0.768
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N 0.768
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N 0.768
orange1.1g021081m.g Citrus sinensis orange1.1g021081m.g N 0.768
PK20005.1 Cannabis sativa PK20005.1 N 0.768
HAP2C Arabidopsis thaliana AT1G72830 N 0.750
HAP2C Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001597 N 0.750
GLYMA19G38800 Glycine max GLYMA19G38800 N 0.750
PRUPE_ppa016008mg Prunus persica PRUPE_ppa016008mg N 0.750
Ca_00866 Cicer arietinum Ca_00866 N 0.750
Ca_14455 Cicer arietinum Ca_14455 N 0.750
Cla017115 Citrullus lanatus Cla017115 N 0.750
Pm027028 Prunus mume Pm027028 N 0.750
29333.m001059 Ricinus communis 29333.m001059 N 0.750
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.750
Eucgr.A02570 Eucalyptus grandis Eucgr.A02570 N 0.750
Eucgr.C00842 Eucalyptus grandis Eucgr.C00842 N 0.750
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N 0.750
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N 0.750
NFYA5 Arabidopsis lyrata Al_scaffold_0001_4860 N 0.732
Al_scaffold_0003_1456 Arabidopsis lyrata Al_scaffold_0003_1456 N 0.732
NFYA5 Arabidopsis thaliana AT1G54160 N 0.732
BGIOSGA023919 Oryza indica BGIOSGA023919 I 0.732
Bo1g134650 Brassica oleracea Bo1g134650 N 0.732
Bo2g079060 Brassica oleracea Bo2g079060 N 0.732
Bo6g116240 Brassica oleracea Bo6g116240 N 0.732
Bo6g116250 Brassica oleracea Bo6g116250 N 0.732
Bra008052 Brassica rapa Bra008052 N 0.732
Bra016031 Brassica rapa Bra016031 N 0.732
Bra021527 Brassica rapa Bra021527 N 0.732
Bra037968 Brassica rapa Bra037968 N 0.732
fgenesh1_pg.C_scaffold_286000001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_286000001 N 0.732
NF-YA8 Arabidopsis lyrata fgenesh2_kg.1__1922__AT1G17590.3 N 0.732
GLYMA02G35190 Glycine max GLYMA02G35190 N 0.732
GLYMA03G36140 Glycine max GLYMA03G36140 N 0.732
GLYMA09G07960 Glycine max GLYMA09G07960 I 0.732
GLYMA10G10240 Glycine max GLYMA10G10240 N 0.732
GLYMA15G18970 Glycine max GLYMA15G18970 I 0.732
GLYMA16G00711 Glycine max GLYMA16G00711 I 0.732
GLYMA17G05920 Glycine max GLYMA17G05920 I 0.732
GSMUA_Achr7G07860_001 Musa acuminata GSMUA_Achr7G07860_001 N 0.732
MTR_1g056530 Medicago truncatula MTR_1g056530 N 0.732
MTR_2g041090 Medicago truncatula MTR_2g041090 N 0.732
MTR_8g019540 Medicago truncatula MTR_8g019540 I 0.732
OB07G27370 Oryza brachyantha OB07G27370 I 0.732
OBART07G21740 Oryza barthii OBART07G21740 I 0.732
OGLUM07G21630 Oryza glumaepatula OGLUM07G21630 I 0.732
OLONG_006035 Oryza longistaminata OLONG_006035 I 0.732
OMERI07G18140 Oryza meridionalis OMERI07G18140 I 0.732
ONIVA06G16650 Oryza nivara ONIVA06G16650 I 0.732
OPUNC07G20270 Oryza punctata OPUNC07G20270 I 0.732
ORGLA07G0166900 Oryza glaberrima ORGLA07G0166900 I 0.732
ORUFI07G22690 Oryza rufipogon ORUFI07G22690 I 0.732
OS07G0608200 Oryza sativa OS07G0608200 I 0.732
POPTR_0006s14740 Populus trichocarpa POPTR_0006s14740 N 0.732
POPTR_0018s07220 Populus trichocarpa POPTR_0018s07220 N 0.732
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N 0.732
TCM_022984 Theobroma cacao TCM_022984 N 0.732
TCM_037576 Theobroma cacao TCM_037576 N 0.732
Ca_10039 Cicer arietinum Ca_10039 N 0.732
Ca_11593 Cicer arietinum Ca_11593 N 0.732
Pm026038 Prunus mume Pm026038 N 0.732
29706.m001307 Ricinus communis 29706.m001307 N 0.732
29912.m005288 Ricinus communis 29912.m005288 N 0.732
cassava2701.m1 Manihot esculenta cassava2701.m1 N 0.732
mgf025421m Mimulus guttatus mgf025421m N 0.732
Aquca_020_00519 Aquilegia coerulea Aquca_020_00519 N 0.732
Bostr.10273s0069 Boechera stricta Bostr.10273s0069 N 0.732
Bostr.28625s0302 Boechera stricta Bostr.28625s0302 N 0.732
Bostr.7128s0065 Boechera stricta Bostr.7128s0065 N 0.732
Cagra.0736s0041 Capsella grandiflora Cagra.0736s0041 N 0.732
Cagra.1013s0019 Capsella grandiflora Cagra.1013s0019 N 0.732
Cagra.20869s0002 Capsella grandiflora Cagra.20869s0002 N 0.732
Carubv10009883m.g Capsella rubella Carubv10009883m.g N 0.732
Carubv10020596m.g Capsella rubella Carubv10020596m.g N 0.732
gene12709-v1.0-hybrid Fragaria vesca gene12709-v1.0-hybrid N 0.732
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N 0.732
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N 0.732
Gorai.009G115000 Gossypium raimondii Gorai.009G115000 N 0.732
MDP0000375005 Malus domestica MDP0000375005 N 0.732
MDP0000827821 Malus domestica MDP0000827821 N 0.732
MDP0000948645 Malus domestica MDP0000948645 N 0.732
SapurV1A.0087s0010 Salix purpurea SapurV1A.0087s0010 N 0.732
SapurV1A.1588s0020 Salix purpurea SapurV1A.1588s0020 N 0.732
Thhalv10011685m.g Eutrema salsugineum Thhalv10011685m.g N 0.732
Thhalv10018869m.g Eutrema salsugineum Thhalv10018869m.g N 0.732
Thhalv10021250m.g Eutrema salsugineum Thhalv10021250m.g N 0.732
PK26326.1 Cannabis sativa PK26326.1 N 0.732
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N 0.732
NFYA8 Arabidopsis thaliana AT1G17590 N 0.714
NFYA6 Arabidopsis thaliana AT3G14020 N 0.714
Bo6g050970 Brassica oleracea Bo6g050970 N 0.714
Bo6g090310 Brassica oleracea Bo6g090310 N 0.714
Bo6g116210 Brassica oleracea Bo6g116210 N 0.714
Bra014368 Brassica rapa Bra014368 N 0.714
Bra030899 Brassica rapa Bra030899 N 0.714
GLYMA07G04050 Glycine max GLYMA07G04050 I 0.714
GLYMA08G13090 Glycine max GLYMA08G13090 N 0.714
GLYMA13G16770 Glycine max GLYMA13G16770 N 0.714
GRMZM5G857944 Zea mays GRMZM5G857944 N 0.714
LPERR03G18110 Leersia perrieri LPERR03G18110 I 0.714
LPERR07G18840 Leersia perrieri LPERR07G18840 I 0.714
MTR_7g106450 Medicago truncatula MTR_7g106450 N 0.714
OB03G30290 Oryza brachyantha OB03G30290 I 0.714
OPUNC03G19990 Oryza punctata OPUNC03G19990 I 0.714
PGSC0003DMG400000272 Solanum tuberosum PGSC0003DMG400000272 N 0.714
PGSC0003DMG400002484 Solanum tuberosum PGSC0003DMG400002484 N 0.714
PGSC0003DMG400011806 Solanum tuberosum PGSC0003DMG400011806 N 0.714
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N 0.714
Si019645m.g Setaria italica Si019645m.g N 0.714
Si030663m.g Setaria italica Si030663m.g I 0.714
Si036728m.g Setaria italica Si036728m.g I 0.714
Solyc03g121940.2 Solanum lycopersicum Solyc03g121940.2 N 0.714
Solyc12g009050.1 Solanum lycopersicum Solyc12g009050.1 N 0.714
TCM_026909 Theobroma cacao TCM_026909 N 0.714
Ca_02713 Cicer arietinum Ca_02713 N 0.714
mg014677m Mimulus guttatus mg014677m N 0.714
Aquca_076_00118 Aquilegia coerulea Aquca_076_00118 N 0.714
Carubv10014390m.g Capsella rubella Carubv10014390m.g N 0.714
evm.TU.supercontig_25.96 Carica papaya evm.TU.supercontig_25.96 N 0.714
Gorai.009G143800 Gossypium raimondii Gorai.009G143800 N 0.714
Gorai.011G004400 Gossypium raimondii Gorai.011G004400 N 0.714
Gorai.012G010900 Gossypium raimondii Gorai.012G010900 N 0.714
MDP0000129029 Malus domestica MDP0000129029 N 0.714
MDP0000588222 Malus domestica MDP0000588222 N 0.714
MDP0000785523 Malus domestica MDP0000785523 N 0.714
Pavir.Ba00442 Panicum virgatum Pavir.Ba00442 I 0.714
Pavir.Ib01915 Panicum virgatum Pavir.Ib01915 I 0.714
Pavir.J05826 Panicum virgatum Pavir.J05826 I 0.714
chr3.CM0724.30.nd Lotus japonicus chr3.CM0724.30.nd I 0.714
LjT30L14.130.nd Lotus japonicus LjT30L14.130.nd N 0.714