YBX2 (Oryctolagus cuniculus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSOCUG00000015064 T164683_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.877 0.877
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.877 0.877
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.877 0.877
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.877 0.877
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000012948 CSD 58 118

Links

Other CSD family TFs
Other Oryctolagus cuniculus TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL82 Arabidopsis thaliana AT5G58890 N 0.000
AGL82 Arabidopsis lyrata scaffold_802501.1 N 0.000
Bo3g021400 Brassica oleracea Bo3g021400 N 0.000
Bo9g135720 Brassica oleracea Bo9g135720 N 0.000
Bostr.26833s0357 Boechera stricta Bostr.26833s0357 N 0.000
Bra002611 Brassica rapa Bra002611 N 0.000
Bra028965 Brassica rapa Bra028965 N 0.000
Cagra.0891s0086 Capsella grandiflora Cagra.0891s0086 N 0.000
Carubv10027979m.g Capsella rubella Carubv10027979m.g N 0.000
Thhalv10015661m.g Eutrema salsugineum Thhalv10015661m.g N 0.000