CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EuGene.0200010100
(
Micromonas sp RCC299
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
EuGene.0200010100
T165440_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
55723
CSD
5
71
VTGKVKWFNTQKGFGFITPDDGSDEIFVHQTAIHSEGFRSLREDEPVEFVIEKSDDGRTKAIEVTGP
Links
Other
CSD
family TFs
Other
Micromonas sp RCC299
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AZW_EuGene.0000110131
Micromonas pusilla
AZW_EuGene.0000110131
N
0.848
cassava12557.valid.m1
Manihot esculenta
cassava12557.valid.m1
N
0.727
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
0.758
Ca_11038
Cicer arietinum
Ca_11038
N
0.742
chr3.CM0112.180.nd
Lotus japonicus
chr3.CM0112.180.nd
N
0.727
chr6.CM0045.280.nd
Lotus japonicus
chr6.CM0045.280.nd
N
0.712
estExt_gwp_gw1.C_410063
Physcomitrella patens
estExt_gwp_gw1.C_410063
N
0.742
estExt_gwp_gw1.C_640002
Physcomitrella patens
estExt_gwp_gw1.C_640002
N
0.742
GLYMA11G11290
Glycine max
GLYMA11G11290
N
0.742
GLYMA12G03470
Glycine max
GLYMA12G03470
N
0.727
gw1.103.78.1
Physcomitrella patens
gw1.103.78.1
N
0.727
IGS.gm_9_00317
Chlorella NC64A
IGS.gm_9_00317
N
0.738
Lus10025058.g
Linum usitatissimum
Lus10025058.g
N
0.742
mgf001526m
Mimulus guttatus
mgf001526m
N
0.712
mgf014458m
Mimulus guttatus
mgf014458m
N
0.712
mgf015980m
Mimulus guttatus
mgf015980m
I
0.727
POPTR_0004s17840
Populus trichocarpa
POPTR_0004s17840
N
0.727
POPTR_0009s13460
Populus trichocarpa
POPTR_0009s13460
N
0.712
SapurV1A.0117s0150
Salix purpurea
SapurV1A.0117s0150
N
0.742
SapurV1A.0514s0160
Salix purpurea
SapurV1A.0514s0160
N
0.712
SELMODRAFT_123455
Selaginella moellendorffii
SELMODRAFT_123455
N
0.727
SELMODRAFT_154869
Selaginella moellendorffii
SELMODRAFT_154869
N
0.712
SELMODRAFT_58801
Selaginella moellendorffii
SELMODRAFT_58801
N
0.719
VIT_03s0038g02130
Vitis vinifera
VIT_03s0038g02130
I
0.773