RBPJ (Sorex araneus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSSARG00000001169 T166125_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		1.000 1.000
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		1.000 1.000
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		1.000 1.000
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		1.000 1.000
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		1.000 1.000
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		1.000 1.000
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		1.000 1.000
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		1.000 1.000
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		1.000 1.000
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		1.000 1.000
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		1.000 1.000
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.794 0.794
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000001067 CSL 15 145

Links

Other CSL family TFs
Other Sorex araneus TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G12950 Brachypodium distachyon BRADI2G12950 N
F775_01832 Aegilops tauschii F775_01832 N
GRMZM2G010085 Zea mays GRMZM2G010085 N
LjSGA_031154.1 Lotus japonicus LjSGA_031154.1 N
LPERR01G13970 Leersia perrieri LPERR01G13970 N
mgf011812m Mimulus guttatus mgf011812m N
MLOC_10329 Hordeum vulgare MLOC_10329 N
OBART01G15490 Oryza barthii OBART01G15490 N
OGLUM01G17850 Oryza glumaepatula OGLUM01G17850 N
OLONG_013778 Oryza longistaminata OLONG_013778 N
OMERI01G14330 Oryza meridionalis OMERI01G14330 N
OPUNC01G16280 Oryza punctata OPUNC01G16280 N
ORGLA01G0126700 Oryza glaberrima ORGLA01G0126700 N
ORUFI01G17280 Oryza rufipogon ORUFI01G17280 N
OS01G0367900 Oryza sativa OS01G0367900 N
Pavir.Ea01374 Panicum virgatum Pavir.Ea01374 N
Pavir.Eb01430 Panicum virgatum Pavir.Eb01430 N
Pavir.J08354 Panicum virgatum Pavir.J08354 N
Pavir.J38656 Panicum virgatum Pavir.J38656 N
PGSC0003DMG400030785 Solanum tuberosum PGSC0003DMG400030785 N
Sb03g014780 Sorghum bicolor Sb03g014780 N
Si000122m.g Setaria italica Si000122m.g N
Solyc06g054560.2 Solanum lycopersicum Solyc06g054560.2 N
Traes_1AS_0523686DD Triticum aestivum Traes_1AS_0523686DD N
Traes_1BS_3B0E04EC6 Triticum aestivum Traes_1BS_3B0E04EC6 N
Traes_1DS_0761D66A3 Triticum aestivum Traes_1DS_0761D66A3 N
TRIUR3_20056 Triticum urartu TRIUR3_20056 N