Pavir.Ea01374 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ea01374 T289129_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea01374.1.p Myb 828 882
Pavir.Ea01374.2.p Myb 786 840

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR01G13970 Leersia perrieri LPERR01G13970 N 0.909
OB01G25270 Oryza brachyantha OB01G25270 N 0.909
Si000122m.g Setaria italica Si000122m.g N 0.909
Pavir.Eb01430 Panicum virgatum Pavir.Eb01430 N 0.909
Sb03g014780 Sorghum bicolor Sb03g014780 N 0.904
BRADI2G12950 Brachypodium distachyon BRADI2G12950 N 0.900
GRMZM2G010085 Zea mays GRMZM2G010085 N 0.892
OBART01G15490 Oryza barthii OBART01G15490 N 0.883
OGLUM01G17850 Oryza glumaepatula OGLUM01G17850 N 0.883
OLONG_013778 Oryza longistaminata OLONG_013778 N 0.883
OMERI01G14330 Oryza meridionalis OMERI01G14330 N 0.883
OPUNC01G16280 Oryza punctata OPUNC01G16280 N 0.883
ORGLA01G0126700 Oryza glaberrima ORGLA01G0126700 N 0.883
ORUFI01G17280 Oryza rufipogon ORUFI01G17280 N 0.883
OS01G0367900 Oryza sativa OS01G0367900 N 0.883
Pavir.J38656 Panicum virgatum Pavir.J38656 N 0.872
Pavir.J08354 Panicum virgatum Pavir.J08354 N 0.830
PGSC0003DMG400030785 Solanum tuberosum PGSC0003DMG400030785 N 0.798
Solyc06g054560.2 Solanum lycopersicum Solyc06g054560.2 N 0.789
mgf011812m Mimulus guttatus mgf011812m N 0.788
F775_01832 Aegilops tauschii F775_01832 N 0.770
MLOC_10329 Hordeum vulgare MLOC_10329 N 0.770
Traes_1BS_3B0E04EC6 Triticum aestivum Traes_1BS_3B0E04EC6 N 0.770
Traes_1DS_0761D66A3 Triticum aestivum Traes_1DS_0761D66A3 N 0.770
TRIUR3_20056 Triticum urartu TRIUR3_20056 N 0.770
Traes_1AS_0523686DD Triticum aestivum Traes_1AS_0523686DD N 0.725
LjSGA_031154.1 Lotus japonicus LjSGA_031154.1 N 0.707