Pavir.J08354 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J08354 T289344_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J08354.1.p Myb 416 475

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G010085 Zea mays GRMZM2G010085 N 0.831
LPERR01G13970 Leersia perrieri LPERR01G13970 N 0.830
OB01G25270 Oryza brachyantha OB01G25270 N 0.830
Si000122m.g Setaria italica Si000122m.g N 0.830
Pavir.Ea01374 Panicum virgatum Pavir.Ea01374 N 0.830
Pavir.Eb01430 Panicum virgatum Pavir.Eb01430 N 0.830
Pavir.J38656 Panicum virgatum Pavir.J38656 N 0.827
Sb03g014780 Sorghum bicolor Sb03g014780 N 0.825
BRADI2G12950 Brachypodium distachyon BRADI2G12950 N 0.821
OBART01G15490 Oryza barthii OBART01G15490 N 0.804
OGLUM01G17850 Oryza glumaepatula OGLUM01G17850 N 0.804
OLONG_013778 Oryza longistaminata OLONG_013778 N 0.804
OMERI01G14330 Oryza meridionalis OMERI01G14330 N 0.804
OPUNC01G16280 Oryza punctata OPUNC01G16280 N 0.804
ORGLA01G0126700 Oryza glaberrima ORGLA01G0126700 N 0.804
ORUFI01G17280 Oryza rufipogon ORUFI01G17280 N 0.804
OS01G0367900 Oryza sativa OS01G0367900 N 0.804
mgf011812m Mimulus guttatus mgf011812m N 0.743
Traes_1AS_0523686DD Triticum aestivum Traes_1AS_0523686DD N 0.736
PGSC0003DMG400030785 Solanum tuberosum PGSC0003DMG400030785 N 0.720
Solyc06g054560.2 Solanum lycopersicum Solyc06g054560.2 N 0.710
F775_01832 Aegilops tauschii F775_01832 N 0.691
MLOC_10329 Hordeum vulgare MLOC_10329 N 0.691
Traes_1BS_3B0E04EC6 Triticum aestivum Traes_1BS_3B0E04EC6 N 0.691
Traes_1DS_0761D66A3 Triticum aestivum Traes_1DS_0761D66A3 N 0.691
TRIUR3_20056 Triticum urartu TRIUR3_20056 N 0.691