CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAM009373
(
Anopheles maculatus
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09271 (LAG1-DNAbind)
IPR015351
AMAM009373
T166369_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.794
0.794
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.794
0.794
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.725
0.725
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.725
0.725
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.725
0.725
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.725
0.725
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.725
0.725
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.725
0.725
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.725
0.725
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.725
0.725
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.725
0.725
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.725
0.725
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.725
0.725
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.725
0.725
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.725
0.725
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAM009373-PA
CSL
4
135
FWVFYLQVAQKSYGNEKRFFCPPPCIYLFGEGWRLRKEQMLRLGESDQSTQLCAFIGIGSPEQEMQPLDLNNPKQYCAAKTLFISDSDKRKHFMLSVKMFYGSGHDIGVFQSKRIKVISKPSKKKQSLKNAD
Links
Other
CSL
family TFs
Other
Anopheles maculatus
TFs
134 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG01353
Caenorhabditis briggsae
CBG01353
I
CBG06614
Caenorhabditis briggsae
CBG06614
I
CBG19143
Caenorhabditis briggsae
CBG19143
I
CBG19144
Caenorhabditis briggsae
CBG19144
I
CBN00299
Caenorhabditis brenneri
CBN00299
I
CRE05778
Caenorhabditis remanei
CRE05778
I
CRE09222
Caenorhabditis remanei
CRE09222
I
CRE14845
Caenorhabditis remanei
CRE14845
I
CRE14846
Caenorhabditis remanei
CRE14846
I
CRE16082
Caenorhabditis remanei
CRE16082
I
CRE18428
Caenorhabditis remanei
CRE18428
I
nhr-110
Caenorhabditis elegans
WBGene00003700
I
nhr-117
Caenorhabditis elegans
WBGene00003707
I
nhr-177
Caenorhabditis elegans
WBGene00017503
D
nhr-179
Caenorhabditis elegans
WBGene00017512
I
nhr-55
Caenorhabditis elegans
WBGene00003645
I