CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FBXL19
(
Oryctolagus cuniculus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSOCUG00000010641
T168160_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.915
0.915
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.872
0.872
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.872
0.872
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.851
0.851
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.809
0.809
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000009169
CxxC
31
77
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Oryctolagus cuniculus
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo00285s360
Brassica oleracea
Bo00285s360
I
Bo3g065910
Brassica oleracea
Bo3g065910
I
Bo7g083780
Brassica oleracea
Bo7g083780
I
Bostr.0556s0333
Boechera stricta
Bostr.0556s0333
I
Bra025217
Brassica rapa
Bra025217
I
Bra032938
Brassica rapa
Bra032938
I
Cagra.3598s0013
Capsella grandiflora
Cagra.3598s0013
I
Carubv10018979m.g
Capsella rubella
Carubv10018979m.g
I
evm.TU.supercontig_1.335
Carica papaya
evm.TU.supercontig_1.335
I
evm.TU.supercontig_1.339
Carica papaya
evm.TU.supercontig_1.339
I
evm.TU.supercontig_50.154
Carica papaya
evm.TU.supercontig_50.154
N
LBD23
Arabidopsis thaliana
AT3G26620
D
LBD24
Arabidopsis thaliana
AT3G26660
I
scaffold_500562.1
Arabidopsis lyrata
scaffold_500562.1
I
TCM_035123
Theobroma cacao
TCM_035123
N
Thhalv10005497m.g
Eutrema salsugineum
Thhalv10005497m.g
I