CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DNMT1
(
Pteropus vampyrus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSPVAG00000003676
T168278_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DNMT1
M01913_2.00
Homo sapiens
NNNNNCGGNN
NNCCGNNNNN
PBM
Weirauch et al.(2014)
pTH7029
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000003477
CxxC
642
688
ENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRC
Links
Other
CxxC
family TFs
Other
Pteropus vampyrus
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.4.390.1
Phytophthora capsici
e_gw1.4.390.1
I
0.000
F443_04247
Phytophthora parasitica
F443_04247
I
0.000
F443_20633
Phytophthora parasitica
F443_20633
I
0.000
fgenesh1_kg.C_scaffold_1000461
Phytophthora capsici
fgenesh1_kg.C_scaffold_1000461
I
0.000
fgenesh_scip_prom.28083.3668
Phytophthora lateralis
fgenesh_scip_prom.28083.3668
I
0.000
fgenesh_scip_prom.46568.10732
Phytophthora kernoviae
fgenesh_scip_prom.46568.10732
I
0.000
fgenesh_scip_prom.46568.5993
Phytophthora kernoviae
fgenesh_scip_prom.46568.5993
I
0.000
HpaG801016
Hyaloperonospora arabidopsidis
HpaG801016
I
0.000
HpaG811872
Hyaloperonospora arabidopsidis
HpaG811872
I
0.000
maker-pag1_scaffold_4-fgenesh-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_4-fgenesh-gene-0.4
I
0.000
maker-par_contig_5774-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_5774-fgenesh-gene-0.0
I
0.000
maker-pir_contig_1153-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1153-fgenesh-gene-0.2
I
0.000
maker-pir_contig_1401-snap-gene-0.1
Pythium irregulare
maker-pir_contig_1401-snap-gene-0.1
I
0.000
maker-piw_contig_2979-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_2979-fgenesh-gene-0.0
I
0.000
maker-pve_contig_695-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_695-fgenesh-gene-0.3
I
0.000
Phyra72796
Phytophthora ramorum
Phyra72796
D
0.000
Physo132994
Phytophthora sojae
Physo132994
I
0.000
Physo142552
Phytophthora sojae
Physo142552
I
0.000
PITG_00513
Phytophthora infestans
PITG_00513
I
0.000
PITG_14364
Phytophthora infestans
PITG_14364
I
0.000
PYU1_G004134
Pythium ultimum
PYU1_G004134
I
0.000