CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DMRTA1
(
Bos taurus
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
ENSBTAG00000001315
T168976_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmrt99B
M01935_2.00
Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW
PBM
Weirauch et al.(2014)
pTH9261
0.960
0.957
dmrt99B
M01211_2.00
Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN
PBM
Lambert et al.(2019)
pTH9799
0.960
0.957
dmrt99B
M03720_2.00
Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND
SELEX
Nitta et al.(2015)
dmrt99B_1
0.960
0.957
DMRTA2
M01930_2.00
Homo sapiens
NNHDTDDNNN
NNNHHAHDNN
PBM
Weirauch et al.(2014)
pTH9198
0.960
0.936
dmrta2
M01937_2.00
Xenopus tropicalis
NNWDWDDN
NHHWHWNN
PBM
Weirauch et al.(2014)
pTH9300
0.960
0.936
DMRTA2
M04692_2.00
Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB
SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX
0.960
0.936
DMRTA2
M10433_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT5_01
0.960
0.936
DMRTA2
M04693_2.00
Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD
SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX
0.960
0.936
dmd-5
M00659_2.00
Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW
PBM
Narasimhan et al.(2015)
pTH10777
0.950
0.872
Dmrt1
M09027_2.00
Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD
Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C
0.940
0.830
DMRT2
M01931_2.00
Homo sapiens
NAATKTATHN
NDATAMATTN
PBM
Weirauch et al.(2014)
pTH9189
0.940
0.872
DMRT2
M10434_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT2_01
0.940
0.872
DMRT1
M01928_2.00
Homo sapiens
NDWGTWDCNN
NNGHWACWHN
PBM
Weirauch et al.(2014)
pTH9197
0.939
0.830
DMRT1
M01929_2.00
Homo sapiens
TGTATCAA
TTGATACA
PBM
Weirauch et al.(2014)
pTH9446
0.939
0.830
DMRT1
M04683_2.00
Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN
SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX
0.939
0.830
DMRT1
M10431_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT1_01
0.939
0.830
DMRT1
M04684_2.00
Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN
SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX
0.939
0.830
DMRT3
M01927_2.00
Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN
PBM
Weirauch et al.(2014)
pTH9188
0.923
0.809
DMRT3
M04681_2.00
Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT
SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX
0.923
0.809
DMRT3
M10430_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT3_01
0.923
0.809
DMRT3
M04682_2.00
Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT
SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX
0.923
0.809
dmd-4
M00656_2.00
Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN
PBM
Narasimhan et al.(2015)
pTH10640
0.923
0.787
dmrt93B
M03718_2.00
Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN
SELEX
Nitta et al.(2015)
dmrt93B_1
0.903
0.681
dmrt93B
M03719_2.00
Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN
SELEX
Nitta et al.(2015)
dmrt93B_2
0.903
0.681
ENSMODG00000010059
M01932_2.00
Monodelphis domestica
NDWGTWDHNN
NNDHWACWHN
PBM
Weirauch et al.(2014)
pTH9215
0.879
0.638
Dmrtc2
M00789_2.00
Mus musculus
NNNATGTATHMNN
NNKDATACATNNN
PBM
Weirauch et al.(2013)
pTH3205
0.878
0.681
DMRTC2
M04685_2.00
Homo sapiens
TGTAWCRTTB
VAAYGWTACA
SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_1
0.878
0.681
DMRTC2
M04686_2.00
Homo sapiens
NWTGTADCAAWW
WWTTGHTACAWN
SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_2
0.878
0.681
DMRTC2
M04688_2.00
Homo sapiens
TGTATCGTTC
GAACGATACA
SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_1
0.878
0.681
DMRTC2
M04689_2.00
Homo sapiens
NDTGTRKCAAWH
DWTTGMYACAHN
SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_2
0.878
0.681
DMRTC2
M10432_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT7_01
0.878
0.681
DMRTC2
M04687_2.00
Homo sapiens
NATGTAKCRAWW
WWTYGMTACATN
SELEX
Yin et al.(2017)
DMRTC2_eDBD_Methyl-HT-SELEX
0.878
0.681
DMRTC2
M04690_2.00
Homo sapiens
YGTATCGTTY
RAACGATACR
SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_1
0.878
0.681
DMRTC2
M04691_2.00
Homo sapiens
NRTGTRKCRAWW
WWTYGMYACAYN
SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_2
0.878
0.681
DMRTC2
M01926_2.00
Cavia porcellus
NNHDWNDN
NHNWHDNN
PBM
Weirauch et al.(2014)
pTH9250
0.876
0.660
Dmrtb1
M09028_2.00
Mus musculus
DGHWACAMWGTWDCHV
BDGHWACWKTGTWDCH
Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C
0.873
0.617
ENSOANG00000013938
M01933_2.00
Ornithorhynchus anatinus
NNWGTWDNNN
NNNHWACWNN
PBM
Weirauch et al.(2014)
pTH9271
0.856
0.638
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000001736
DM
85
131
RTPKCARCRNHGVVSALKGHKRFCRWRDCACAKCTLIAERQRVMAAQ
Links
Other
DM
family TFs
Other
Bos taurus
TFs
631 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB006874
Anopheles albimanus
AALB006874
N
ACEP26305
Atta cephalotes
ACEP26305
N
AEPI010431
Anopheles epiroticus
AEPI010431
N
Alligator_sinensis_CCG004399.1
Alligator sinensis
Alligator_sinensis_CCG004399.1
N
ANCCEY_04348
Ancylostoma ceylanicum
ANCCEY_04348
N
ASIS015315
Anopheles sinensis
ASIS015315
N
CBG15039
Caenorhabditis briggsae
CBG15039
N
CGI_10007832
Crassostrea gigas
CGI_10007832
N
CJA11256
Caenorhabditis japonica
CJA11256
N
CLEC006124
Cimex lectularius
CLEC006124
N
Cmyd_10017639
Chelonia mydas
Cmyd_10017639
I
DMBX1
Monodelphis domestica
ENSMODG00000001963
N
DPRX
Choloepus hoffmanni
ENSCHOG00000010851
N
EFV55958
Trichinella spiralis
EFV55958
N
ENSCJAG00000011381
Callithrix jacchus
ENSCJAG00000011381
N
ENSCSAG00000003788
Chlorocebus sabaeus
ENSCSAG00000003788
N
ENSCSAG00000014537
Chlorocebus sabaeus
ENSCSAG00000014537
I
ENSLAFG00000000420
Loxodonta africana
ENSLAFG00000000420
N
ENSOARG00000006291
Ovis aries
ENSOARG00000006291
N
ENSOGAG00000034150
Otolemur garnettii
ENSOGAG00000034150
N
ENSPANG00000010570
Papio anubis
ENSPANG00000010570
N
ENSPVAG00000005359
Pteropus vampyrus
ENSPVAG00000005359
N
ENSSTOG00000026735
Ictidomys tridecemlineatus
ENSSTOG00000026735
N
ENSTTRG00000007283
Tursiops truncatus
ENSTTRG00000007283
N
GB50469
Apis mellifera
GB50469
N
GK22279
Drosophila willistoni
FBgn0224264
N
GPLIN_000181000
Globodera pallida
GPLIN_000181000
N
HMEL015659
Heliconius melpomene
HMEL015659
I
Hsal_07660--XP_394161.1_APIME
Harpegnathos saltator
Hsal_07660--XP_394161.1_APIME
I
ISCW006446
Ixodes scapularis
ISCW006446
N
LDEC016519
Leptinotarsa decemlineata
LDEC016519
N
LDEC023625
Leptinotarsa decemlineata
LDEC023625
N
LEUTX
Homo sapiens
ENSG00000213921
N
LEUTX
Pan troglodytes
ENSPTRG00000033892
N
LEUTX
Canis familiaris
ENSCAFG00000028552
N
LEUTX
Bos taurus
ENSBTAG00000046425
N
LEUTX
Felis catus
ENSFCAG00000023272
N
Ocbimv22035611m.g
Octopus bimaculoides
Ocbimv22035611m.g
I
OESDEN_16215
Oesophagostomum dentatum
OESDEN_16215
N
Otx2
Mus musculus
ENSMUSG00000021848
D
OTX2
Choloepus hoffmanni
ENSCHOG00000013827
I
pitx1
Gasterosteus aculeatus
ENSGACG00000016483
I
Sjc_0128760
Schistosoma japonicum
Sjc_0128760
N
SMTD_0001972301
Schistosoma mattheei
SMTD_0001972301
N
snap_masked-nMf.1.1.scaf19847-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf19847-processed-gene-0.1
N
SPRG_09223
Saprolegnia parasitica
SPRG_09223
N
TELCIR_18721
Teladorsagia circumcincta
TELCIR_18721
N
TPRX1
Homo sapiens
ENSG00000178928
I
TTRE_0000079401
Trichuris trichiura
TTRE_0000079401
N
unc-30
Caenorhabditis elegans
WBGene00006766
I
WUBG_02192
Wuchereria bancrofti
WUBG_02192
N
XP_002164986.1
Hydra magnipapillata
XP_002164986.1
N
YQE_12574
Dendroctonus ponderosae
YQE_12574
N