nLs.2.1.2.g05589 (Litomosoides sigmodontis)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 nLs.2.1.2.g05589 T169941_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bm2567
M01923_2.00 		Brugia malayi
NNNWGTTKHN
NDMAACWNNN		 PBM
Weirauch et al.(2014)
pTH9246 		0.970 1.000
WUBG_11979
M01922_2.00 		Wuchereria bancrofti
ATGTWTCA
TGAWACAT		 PBM
Weirauch et al.(2014)
pTH9296 		0.969 0.979
dmd-10
M00657_2.00 		Caenorhabditis elegans
AWTGTTTC
GAAACAWT		 PBM
Narasimhan et al.(2015)
pTH9142 		0.956 0.872
CBG09413
M01924_2.00 		Caenorhabditis briggsae
AATGTTTC
GAAACATT		 PBM
Weirauch et al.(2014)
pTH8330 		0.952 0.851
CBN06605
M01925_2.00 		Caenorhabditis brenneri
NWGTWKN
NMWACWN		 PBM
Weirauch et al.(2014)
pTH9247 		0.950 0.851
CJA05633_CONSTRUCT
M01936_2.00 		PBM CONSTRUCTS
NWGTWDN
NHWACWN		 PBM
Weirauch et al.(2014)
pTH9344 		0.950 0.851
dmd-3
M00658_2.00 		Caenorhabditis elegans
NNWGTWDN
NHWACWNN		 PBM
Narasimhan et al.(2015)
pTH10638 		0.914 0.766
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t05589-RA DM 45 91

Links

Other DM family TFs
Other Litomosoides sigmodontis TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_05375 Cladophialophora psammophila A1O5_05375 N
ANIA_00094 Aspergillus nidulans CADANIAG00002656 N
AUEXF2481DRAFT_41260 Aureobasidium subglaciale AUEXF2481DRAFT_41260 N
BDDG_06653 Blastomyces dermatitidis BDDG_06653 N
CGGC5_10999 Colletotrichum gloeosporioides CGGC5_10999 N
CH063_11411 Colletotrichum higginsianum CH063_11411 N
CSUB01_08092 Colletotrichum sublineola CSUB01_08092 N
estExt_fgenesh1_pg.C_80373 Cryphonectria parasitica estExt_fgenesh1_pg.C_80373 N
e_gw1.9.18.1 Nectria haematococca e_gw1.9.18.1 N
F503_06049 Ophiostoma piceae uamh F503_06049 I
GGTG_12739 Gaeumannomyces graminis GGTG_12739 N
GLRG_11053 Colletotrichum graminicola GLRG_11053 N
GMDG_04760 Pseudogymnoascus destructans GMDG_04760 I
M437DRAFT_57903 Aureobasidium melanogenum M437DRAFT_57903 N
M438DRAFT_314995 Aureobasidium pullulans M438DRAFT_314995 N
MAPG_09245 Magnaporthe poae MAPG_09245 N
NechaG45265 Fusarium solani NechaG45265 N
PAAG_02454 Paracoccidioides sp lutzii PAAG_02454 N
PABG_04947 Paracoccidioides brasiliensis PABG_04947 N
PFICI_05072 Pestalotiopsis fici PFICI_05072 N
VDAG_07398 Verticillium dahliae VDAG_07398 N
VDBG_09240 Verticillium alfalfae VDBG_09240 N
VDBG_09240 Verticillium albo atrum VDBG_09240 N
Z519_08249 Cladophialophora bantiana Z519_08249 N