FHY3 (Vitis vinifera)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 VIT_03s0017g01780 T180834_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.900 0.900
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.900 0.900
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_03s0017g01780.t01 FAR1 89 191

Links

Other FAR1 family TFs
Other Vitis vinifera TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013478 Ailuropoda melanoleuca ENSAMEG00000013478 I
ENSBTAP00000019345-D1 Bos grunniens ENSBTAP00000019345-D1 I
ENSCSAG00000015065 Chlorocebus sabaeus ENSCSAG00000015065 I
ENSDNOG00000024891 Dasypus novemcinctus ENSDNOG00000024891 I
ENSETEG00000016371 Echinops telfairi ENSETEG00000016371 I
ENSGMOG00000017815 Gadus morhua ENSGMOG00000017815 I
ENSMICG00000011160 Microcebus murinus ENSMICG00000011160 I
ENSMLUG00000015053 Myotis lucifugus ENSMLUG00000015053 I
ENSMMUG00000019719 Macaca mulatta ENSMMUG00000019719 I
ENSMPUG00000017558 Mustela putorius furo ENSMPUG00000017558 I
ENSNLEG00000006985 Nomascus leucogenys ENSNLEG00000006985 I
ENSOARG00000013174 Ovis aries ENSOARG00000013174 I
ENSONIG00000020305 Oreochromis niloticus ENSONIG00000020305 I
ENSPANG00000007536 Papio anubis ENSPANG00000007536 I
ENSPFOG00000015709 Poecilia formosa ENSPFOG00000015709 I
ENSSTOG00000005866 Ictidomys tridecemlineatus ENSSTOG00000005866 I
ENSTNIG00000004434 Tetraodon nigroviridis ENSTNIG00000004434 I
ENSXMAG00000009637 Xiphophorus maculatus ENSXMAG00000009637 I
GB53867 Apis mellifera GB53867 I
GM16048 Drosophila sechellia FBgn0170964 I
Myotis_brandtii_SNAI1_10026057 Myotis brandtii Myotis_brandtii_SNAI1_10026057 I
Snai1 Rattus norvegicus ENSRNOG00000009594 I
SNAI1 Pteropus vampyrus ENSPVAG00000004119 I
SNAI1 Tupaia belangeri ENSTBEG00000012262 I
SNAI1 Tursiops truncatus ENSTTRG00000002029 I
SNAI1 Pan troglodytes ENSPTRG00000013614 I
SNAI1 Procavia capensis ENSPCAG00000011934 I
SNAI1 Bos taurus ENSBTAG00000014554 I
SNAI1 Oryctolagus cuniculus ENSOCUG00000005422 I
SNAI1 Canis familiaris ENSCAFG00000011499 I
SNAI1 Callithrix jacchus ENSCJAG00000000518 I
SNAI1 Cavia porcellus ENSCPOG00000026663 I
SNAI1 Dasypus novemcinctus ENSDNOG00000023834 I
SNAI1 Equus caballus ENSECAG00000009787 I
SNAI1 Otolemur garnettii ENSOGAG00000030111 I
SNAI1 Felis catus ENSFCAG00000010558 I
SNAI1 Homo sapiens ENSG00000124216 D
SNAI1 Gorilla gorilla ENSGGOG00000024422 I
SNAI1 Loxodonta africana ENSLAFG00000030265 I
Snai1 Mus musculus ENSMUSG00000042821 D
snai1a Tetraodon nigroviridis ENSTNIG00000007311 I
snai1a Takifugu rubripes ENSTRUG00000012293 I
snai1a Gasterosteus aculeatus ENSGACG00000010147 I
snai1a Danio rerio ENSDARG00000056995 I
snai3 Xenopus tropicalis XB-GENE-488030 I
snai3 Takifugu rubripes ENSTRUG00000002385 I