CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm003854
(
Prunus mume
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pm003854
T180980_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm003854
FAR1
63
157
EYYSEFAKQCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTSHERKPQRNRKSSRCGCQAYMRISKTTELGAPEWRVTGFANHHNHELLE
Links
Other
FAR1
family TFs
Other
Prunus mume
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27996.m000153
Ricinus communis
27996.m000153
N
cassava27522.m1
Manihot esculenta
cassava27522.m1
N
cassava8426.m1
Manihot esculenta
cassava8426.m1
N
Ca_13608
Cicer arietinum
Ca_13608
N
Ca_13610
Cicer arietinum
Ca_13610
N
Eucgr.D01630
Eucalyptus grandis
Eucgr.D01630
N
evm.TU.supercontig_489.5
Carica papaya
evm.TU.supercontig_489.5
N
evm.TU.supercontig_489.6
Carica papaya
evm.TU.supercontig_489.6
N
gene18542-v1.0-hybrid
Fragaria vesca
gene18542-v1.0-hybrid
N
GLYMA08G17747
Glycine max
GLYMA08G17747
N
GLYMA15G41400
Glycine max
GLYMA15G41400
N
Gorai.005G218900
Gossypium raimondii
Gorai.005G218900
N
MDP0000209483
Malus domestica
MDP0000209483
N
MDP0000216053
Malus domestica
MDP0000216053
N
MDP0000280921
Malus domestica
MDP0000280921
N
MDP0000791364
Malus domestica
MDP0000791364
N
mgf020354m
Mimulus guttatus
mgf020354m
N
MTR_1g060700
Medicago truncatula
MTR_1g060700
N
MTR_2g067000
Medicago truncatula
MTR_2g067000
N
Pm010610
Prunus mume
Pm010610
N
POPTR_0001s46530
Populus trichocarpa
POPTR_0001s46530
N
POPTR_0011s16100
Populus trichocarpa
POPTR_0011s16100
N
PRUPE_ppa017597mg
Prunus persica
PRUPE_ppa017597mg
N
SapurV1A.0527s0040
Salix purpurea
SapurV1A.0527s0040
N
SapurV1A.0602s0120
Salix purpurea
SapurV1A.0602s0120
N
TCM_027032
Theobroma cacao
TCM_027032
N
TCM_033386
Theobroma cacao
TCM_033386
N
Thhalv10009765m.g
Eutrema salsugineum
Thhalv10009765m.g
N
VIT_10s0092g00030
Vitis vinifera
VIT_10s0092g00030
N