cassava6719.valid.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava6719.valid.m1 T181063_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava6719.valid.m1 FAR1 60 145

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g039630 Brassica oleracea Bo6g039630 N 0.860
Bostr.0124s0040 Boechera stricta Bostr.0124s0040 N 0.907
Cagra.4237s0016 Capsella grandiflora Cagra.4237s0016 N 0.919
Carubv10008456m.g Capsella rubella Carubv10008456m.g N 0.919
Ca_07960 Cicer arietinum Ca_07960 N 0.907
chr6.CM0066.220.nc Lotus japonicus chr6.CM0066.220.nc N 0.837
Ciclev10027619m.g Citrus clementina Ciclev10027619m.g N 0.988
Cucsa.096050 Cucumis sativus Cucsa.096050 N 0.709
Cucsa.105540 Cucumis sativus Cucsa.105540 N 0.930
Eucgr.J03078 Eucalyptus grandis Eucgr.J03078 N 0.988
evm.TU.supercontig_167.15 Carica papaya evm.TU.supercontig_167.15 N 0.942
FRS6 Arabidopsis thaliana AT1G52520 N 0.906
FRS6 Vitis vinifera VIT_09s0002g07400 N 1.000
FRS6 Populus trichocarpa POPTR_0003s02570 N 0.953
gene15714-v1.0-hybrid Fragaria vesca gene15714-v1.0-hybrid N 0.930
GLYMA09G02250 Glycine max GLYMA09G02250 N 0.930
GLYMA15G13150 Glycine max GLYMA15G13150 N 0.930
Gorai.006G101600 Gossypium raimondii Gorai.006G101600 N 0.721
Gorai.011G085000 Gossypium raimondii Gorai.011G085000 N 0.965
mg017777m Mimulus guttatus mg017777m N 0.907
PK01244.1 Cannabis sativa PK01244.1 N 0.953
Pm013706 Prunus mume Pm013706 N 0.988
PRUPE_ppa001906mg Prunus persica PRUPE_ppa001906mg N 0.721
PRUPE_ppa002952mg Prunus persica PRUPE_ppa002952mg N 0.988
SapurV1A.0199s0230 Salix purpurea SapurV1A.0199s0230 N 0.942
Solyc03g117520.1 Solanum lycopersicum Solyc03g117520.1 N 0.930
TCM_027271 Theobroma cacao TCM_027271 N 0.977
TCM_027272 Theobroma cacao TCM_027272 N 0.709
Thhalv10011274m.g Eutrema salsugineum Thhalv10011274m.g N 0.895