CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0199s0230
(
Salix purpurea
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
SapurV1A.0199s0230
T181918_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0199s0230.1.p
FAR1
50
135
NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNRLRKETRTGCPAMVRMRLADSKRWRVLEVMLEHNHSLGV
SapurV1A.0199s0230.2.p
FAR1
50
135
NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNRLRKETRTGCPAMVRMRLADSKRWRVLEVMLEHNHSLGV
SapurV1A.0199s0230.3.p
FAR1
50
135
NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNRLRKETRTGCPAMVRMRLADSKRWRVLEVMLEHNHSLGV
SapurV1A.0199s0230.4.p
FAR1
50
135
NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNRLRKETRTGCPAMVRMRLADSKRWRVLEVMLEHNHSLGV
Links
Other
FAR1
family TFs
Other
Salix purpurea
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FRS6
Populus trichocarpa
POPTR_0003s02570
N
0.988
PRUPE_ppa002952mg
Prunus persica
PRUPE_ppa002952mg
N
0.942
FRS6
Vitis vinifera
VIT_09s0002g07400
N
0.942
Pm013706
Prunus mume
Pm013706
N
0.942
cassava6719.valid.m1
Manihot esculenta
cassava6719.valid.m1
N
0.942
Ciclev10027619m.g
Citrus clementina
Ciclev10027619m.g
N
0.942
Eucgr.J03078
Eucalyptus grandis
Eucgr.J03078
N
0.941
TCM_027271
Theobroma cacao
TCM_027271
N
0.930
Solyc03g117520.1
Solanum lycopersicum
Solyc03g117520.1
N
0.919
GLYMA15G13150
Glycine max
GLYMA15G13150
N
0.907
Cucsa.105540
Cucumis sativus
Cucsa.105540
N
0.907
gene15714-v1.0-hybrid
Fragaria vesca
gene15714-v1.0-hybrid
N
0.907
Gorai.011G085000
Gossypium raimondii
Gorai.011G085000
N
0.907
PK01244.1
Cannabis sativa
PK01244.1
N
0.907
mg017777m
Mimulus guttatus
mg017777m
N
0.895
evm.TU.supercontig_167.15
Carica papaya
evm.TU.supercontig_167.15
N
0.895
GLYMA09G02250
Glycine max
GLYMA09G02250
N
0.884
Bo6g039630
Brassica oleracea
Bo6g039630
N
0.860
Ca_07960
Cicer arietinum
Ca_07960
N
0.860
Bostr.0124s0040
Boechera stricta
Bostr.0124s0040
N
0.860
Cagra.4237s0016
Capsella grandiflora
Cagra.4237s0016
N
0.860
Carubv10008456m.g
Capsella rubella
Carubv10008456m.g
N
0.860
FRS6
Arabidopsis thaliana
AT1G52520
N
0.859
Thhalv10011274m.g
Eutrema salsugineum
Thhalv10011274m.g
N
0.849
chr6.CM0066.220.nc
Lotus japonicus
chr6.CM0066.220.nc
N
0.837