cassava9536.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava9536.m1 T181064_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava9536.m1 FAR1 78 170

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_007_00960 Aquilegia coerulea Aquca_007_00960 N 0.800
Bo3g034290 Brassica oleracea Bo3g034290 N 0.944
Bostr.25542s0007 Boechera stricta Bostr.25542s0007 N 0.933
Cagra.1383s0007 Capsella grandiflora Cagra.1383s0007 N 0.922
Carubv10007256m.g Capsella rubella Carubv10007256m.g N 0.922
cassava23399.valid.m1 Manihot esculenta cassava23399.valid.m1 N 0.778
Ciclev10027888m.g Citrus clementina Ciclev10027888m.g N 0.989
Cla015971 Citrullus lanatus Cla015971 N 0.978
Cucsa.099970 Cucumis sativus Cucsa.099970 N 0.989
Eucgr.I01547 Eucalyptus grandis Eucgr.I01547 N 0.989
evm.TU.supercontig_60.4 Carica papaya evm.TU.supercontig_60.4 N 1.000
FRS5 Arabidopsis thaliana AT4G38180 N 0.944
FRS5 Vitis vinifera VIT_03s0038g04140 N 0.956
gene12983-v1.0-hybrid Fragaria vesca gene12983-v1.0-hybrid N 0.767
gene17117-v1.0-hybrid Fragaria vesca gene17117-v1.0-hybrid N 0.978
GLYMA01G00321 Glycine max GLYMA01G00321 N 0.989
GLYMA11G09400 Glycine max GLYMA11G09400 N 0.789
GLYMA14G00240 Glycine max GLYMA14G00240 N 0.989
Gorai.013G065300 Gossypium raimondii Gorai.013G065300 N 0.989
MDP0000200105 Malus domestica MDP0000200105 N 0.967
MDP0000261311 Malus domestica MDP0000261311 N 0.756
MDP0000308670 Malus domestica MDP0000308670 N 0.989
mgf015959m Mimulus guttatus mgf015959m N 0.956
PK08522.1 Cannabis sativa PK08522.1 N 0.989
Pm020704 Prunus mume Pm020704 N 0.989
Pm026968 Prunus mume Pm026968 N 0.778
POPTR_0004s21880 Populus trichocarpa POPTR_0004s21880 N 0.967
POPTR_0009s17110 Populus trichocarpa POPTR_0009s17110 N 0.978
POPTR_0011s14880 Populus trichocarpa POPTR_0011s14880 N 0.811
PRUPE_ppa001597mg Prunus persica PRUPE_ppa001597mg N 0.989
PRUPE_ppa001606mg Prunus persica PRUPE_ppa001606mg N 0.778
SapurV1A.0047s0510 Salix purpurea SapurV1A.0047s0510 N 0.811
SapurV1A.0216s0420 Salix purpurea SapurV1A.0216s0420 N 0.967
SapurV1A.2929s0020 Salix purpurea SapurV1A.2929s0020 N 0.967
Solyc01g112320.2 Solanum lycopersicum Solyc01g112320.2 N 0.911
TCM_007609 Theobroma cacao TCM_007609 N 1.000
Thhalv10024456m.g Eutrema salsugineum Thhalv10024456m.g N 0.944
VIT_04s0044g01920 Vitis vinifera VIT_04s0044g01920 N 0.811