CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HmN_000789200
(
Hymenolepis microstoma
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
HmN_000789200
T182175_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000789200
FAR1
31
99
RYQGVKFKVASSFRYNEGDPRKETLAYSKATFACVLKRTHHCPSFFRVEVRKGVLQVVERAMEHNHSRI
HmN_000789200
FAR1
136
234
EEATGSGFRVGRSDLFKPGEPERDQFRYRRITYECVHFGQRKSVAANAGTRLMYDLNGSASPRSPTARLGCMAKFDVRYSPQGFKITAVVMKHNHKVSP
Links
Other
FAR1
family TFs
Other
Hymenolepis microstoma
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA002351
Oryza indica
BGIOSGA002351
N
Ciclev10030684m.g
Citrus clementina
Ciclev10030684m.g
N
GLYMA18G03080
Glycine max
GLYMA18G03080
N
GRMZM2G139369
Zea mays
GRMZM2G139369
N
LjT47B05.50.nd
Lotus japonicus
LjT47B05.50.nd
N
LPERR01G03530
Leersia perrieri
LPERR01G03530
N
MTR_3g070780
Medicago truncatula
MTR_3g070780
N
OB01G13760
Oryza brachyantha
OB01G13760
N
OBART01G03880
Oryza barthii
OBART01G03880
N
OGLUM01G04180
Oryza glumaepatula
OGLUM01G04180
N
OLONG_021562
Oryza longistaminata
OLONG_021562
N
OMERI01G03770
Oryza meridionalis
OMERI01G03770
N
ONIVA01G04320
Oryza nivara
ONIVA01G04320
N
OPUNC01G03540
Oryza punctata
OPUNC01G03540
N
ORUFI01G03990
Oryza rufipogon
ORUFI01G03990
N
OS01G0158900
Oryza sativa
OS01G0158900
N
Pavir.J07154
Panicum virgatum
Pavir.J07154
N
PK03289.1
Cannabis sativa
PK03289.1
N
POPTR_0010s19600
Populus trichocarpa
POPTR_0010s19600
N
Sb03g005310
Sorghum bicolor
Sb03g005310
N
Si000223m.g
Setaria italica
Si000223m.g
N