CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORUFI01G03990
(
Oryza rufipogon
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
ORUFI01G03990
T300736_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI01G03990.1
NFX
193
226
CGDVCGRRLNADRDSGCEHNCLLLCHPGPCPPCP
ORUFI01G03990.1
NFX
262
280
CGIHRCPVDCHDGPCPPCA
ORUFI01G03990.1
NFX
315
333
CGKHSCERGCHAGKCGGCP
ORUFI01G03990.1
NFX
369
388
CGRHKCPERCHRGSCVETCR
ORUFI01G03990.1
NFX
422
440
CGRHACRRRCCEGDCAPCP
ORUFI01G03990.1
NFX
449
467
CGNHKCLSPCHRGACAPCP
ORUFI01G03990.1
NFX
512
526
CRPHKCHYGACPPCK
ORUFI01G03990.1
NFX
617
628
CGNHYCTKACHV
ORUFI01G03990.1
NFX
669
688
PPCSHPCPLPCHLNDCPPCK
Links
Other
NFX
family TFs
Other
Oryza rufipogon
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART01G03880
Oryza barthii
OBART01G03880
N
1.000
OGLUM01G04180
Oryza glumaepatula
OGLUM01G04180
N
1.000
OLONG_021562
Oryza longistaminata
OLONG_021562
N
1.000
ONIVA01G04320
Oryza nivara
ONIVA01G04320
N
1.000
ORGLA01G0034200
Oryza glaberrima
ORGLA01G0034200
N
1.000
OS01G0158900
Oryza sativa
OS01G0158900
N
1.000
BGIOSGA002351
Oryza indica
BGIOSGA002351
N
0.994
OPUNC01G03540
Oryza punctata
OPUNC01G03540
N
0.975
OMERI01G03770
Oryza meridionalis
OMERI01G03770
N
0.968
LPERR01G03530
Leersia perrieri
LPERR01G03530
N
0.956
OB01G13760
Oryza brachyantha
OB01G13760
N
0.950
Si000223m.g
Setaria italica
Si000223m.g
N
0.790
Ciclev10030684m.g
Citrus clementina
Ciclev10030684m.g
N
0.788
LjT47B05.50.nd
Lotus japonicus
LjT47B05.50.nd
N
0.788
PK03289.1
Cannabis sativa
PK03289.1
N
0.778
MTR_3g070780
Medicago truncatula
MTR_3g070780
N
0.763
GRMZM2G139369
Zea mays
GRMZM2G139369
N
0.740
Sb03g005310
Sorghum bicolor
Sb03g005310
N
0.740
Pavir.J07154
Panicum virgatum
Pavir.J07154
N
0.740
POPTR_0010s19600
Populus trichocarpa
POPTR_0010s19600
N
0.724
GLYMA18G03080
Glycine max
GLYMA18G03080
N
0.709